Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
TOP1P11387 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.6■□□□□ 0.89
TOP1P11387 AC021087.4-201ENST00000563761 564 ntBASIC20.6■□□□□ 0.89
TOP1P11387 AC109462.3-201ENST00000573934 613 ntBASIC20.6■□□□□ 0.89
TOP1P11387 NKAPP1-205ENST00000585790 367 ntBASIC20.6■□□□□ 0.89
TOP1P11387 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TOP1P11387 AC148477.8-201ENST00000624298 468 ntBASIC20.6■□□□□ 0.89
TOP1P11387 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TOP1P11387 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
TOP1P11387 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TOP1P11387 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TOP1P11387 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TOP1P11387 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TOP1P11387 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TOP1P11387 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TOP1P11387 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TOP1P11387 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
TOP1P11387 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.59■□□□□ 0.89
TOP1P11387 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.59■□□□□ 0.89
TOP1P11387 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TOP1P11387 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
TOP1P11387 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TOP1P11387 HLA-A-201ENST00000376802 1334 ntBASIC20.59■□□□□ 0.89
TOP1P11387 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TOP1P11387 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TOP1P11387 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.59■□□□□ 0.89
TOP1P11387 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TOP1P11387 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.59■□□□□ 0.89
TOP1P11387 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TOP1P11387 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TOP1P11387 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TOP1P11387 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.59■□□□□ 0.89
TOP1P11387 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TOP1P11387 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TOP1P11387 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TOP1P11387 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TOP1P11387 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TOP1P11387 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.59■□□□□ 0.89
TOP1P11387 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.59■□□□□ 0.89
TOP1P11387 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TOP1P11387 RNA5SP419-201ENST00000515908 135 ntBASIC20.59■□□□□ 0.89
TOP1P11387 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TOP1P11387 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.59■□□□□ 0.89
TOP1P11387 AL773604.1-201ENST00000617417 272 ntBASIC20.59■□□□□ 0.89
TOP1P11387 AC073592.4-201ENST00000623827 446 ntBASIC20.59■□□□□ 0.89
TOP1P11387 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.59■□□□□ 0.89
TOP1P11387 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TOP1P11387 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TOP1P11387 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TOP1P11387 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TOP1P11387 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TOP1P11387 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.59■□□□□ 0.89
TOP1P11387 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TOP1P11387 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
TOP1P11387 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TOP1P11387 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TOP1P11387 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
TOP1P11387 AC132938.5-201ENST00000624980 1813 ntBASIC20.58■□□□□ 0.89
TOP1P11387 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.58■□□□□ 0.89
TOP1P11387 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TOP1P11387 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TOP1P11387 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TOP1P11387 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TOP1P11387 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
TOP1P11387 AC002558.1-201ENST00000488906 803 ntBASIC20.58■□□□□ 0.89
TOP1P11387 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TOP1P11387 SIGLEC16-201ENST00000599858 1437 ntBASIC20.58■□□□□ 0.88
TOP1P11387 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TOP1P11387 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
TOP1P11387 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
TOP1P11387 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TOP1P11387 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TOP1P11387 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.58■□□□□ 0.88
TOP1P11387 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
TOP1P11387 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TOP1P11387 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.58■□□□□ 0.88
TOP1P11387 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.58■□□□□ 0.88
TOP1P11387 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.58■□□□□ 0.88
TOP1P11387 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TOP1P11387 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.58■□□□□ 0.88
TOP1P11387 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.58■□□□□ 0.88
TOP1P11387 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TOP1P11387 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.58■□□□□ 0.88
TOP1P11387 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
TOP1P11387 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.58■□□□□ 0.88
TOP1P11387 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
TOP1P11387 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TOP1P11387 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TOP1P11387 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TOP1P11387 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TOP1P11387 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TOP1P11387 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TOP1P11387 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TOP1P11387 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TOP1P11387 SPDYE21P-201ENST00000413323 827 ntBASIC20.57■□□□□ 0.88
TOP1P11387 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TOP1P11387 AC005104.2-201ENST00000427818 678 ntBASIC20.57■□□□□ 0.88
TOP1P11387 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.57■□□□□ 0.88
TOP1P11387 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.57■□□□□ 0.88
TOP1P11387 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms