Protein–RNA interactions for Protein: P11229

CHRM1, Muscarinic acetylcholine receptor M1, humanhuman

Predicted RBP Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM1P11229 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CHRM1P11229 AC126763.1-201ENST00000552015 2118 ntBASIC18.45■□□□□ 0.54
CHRM1P11229 AC023824.1-201ENST00000562945 2975 ntBASIC18.45■□□□□ 0.54
CHRM1P11229 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHRM1P11229 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHRM1P11229 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.45■□□□□ 0.54
CHRM1P11229 LINC02228-204ENST00000642115 2962 ntBASIC18.45■□□□□ 0.54
CHRM1P11229 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.45■□□□□ 0.54
CHRM1P11229 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHRM1P11229 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.45■□□□□ 0.54
CHRM1P11229 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHRM1P11229 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CHRM1P11229 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHRM1P11229 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHRM1P11229 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHRM1P11229 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.44■□□□□ 0.54
CHRM1P11229 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC18.44■□□□□ 0.54
CHRM1P11229 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.44■□□□□ 0.54
CHRM1P11229 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRM1P11229 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRM1P11229 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHRM1P11229 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRM1P11229 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRM1P11229 LRRIQ3-203ENST00000370911 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRM1P11229 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRM1P11229 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRM1P11229 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
CHRM1P11229 RCN1P2-201ENST00000398357 915 ntBASIC18.44■□□□□ 0.54
CHRM1P11229 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHRM1P11229 AC018712.1-201ENST00000455767 687 ntBASIC18.44■□□□□ 0.54
CHRM1P11229 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC18.44■□□□□ 0.54
CHRM1P11229 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHRM1P11229 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.44■□□□□ 0.54
CHRM1P11229 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.44■□□□□ 0.54
CHRM1P11229 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CHRM1P11229 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CHRM1P11229 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CHRM1P11229 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRM1P11229 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.44■□□□□ 0.54
CHRM1P11229 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHRM1P11229 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CHRM1P11229 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRM1P11229 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRM1P11229 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRM1P11229 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.44■□□□□ 0.54
CHRM1P11229 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CHRM1P11229 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.44■□□□□ 0.54
CHRM1P11229 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRM1P11229 AC022211.2-201ENST00000585075 2527 ntBASIC18.44■□□□□ 0.54
CHRM1P11229 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CHRM1P11229 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHRM1P11229 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CHRM1P11229 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHRM1P11229 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRM1P11229 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHRM1P11229 WIZP1-201ENST00000531444 2299 ntBASIC18.43■□□□□ 0.54
CHRM1P11229 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CHRM1P11229 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRM1P11229 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRM1P11229 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHRM1P11229 AL118508.1-201ENST00000613502 2345 ntBASIC18.43■□□□□ 0.54
CHRM1P11229 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRM1P11229 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRM1P11229 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRM1P11229 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.43■□□□□ 0.54
CHRM1P11229 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRM1P11229 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRM1P11229 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRM1P11229 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.43■□□□□ 0.54
CHRM1P11229 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CHRM1P11229 IL20RB-AS1-201ENST00000462176 562 ntTSL 4 BASIC18.43■□□□□ 0.54
CHRM1P11229 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.43■□□□□ 0.54
CHRM1P11229 AC079776.4-201ENST00000511039 504 ntBASIC18.43■□□□□ 0.54
CHRM1P11229 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC18.43■□□□□ 0.54
CHRM1P11229 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.43■□□□□ 0.54
CHRM1P11229 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.43■□□□□ 0.54
CHRM1P11229 TMF1P1-201ENST00000576058 373 ntBASIC18.43■□□□□ 0.54
CHRM1P11229 AC130324.1-201ENST00000584157 831 ntTSL 3 BASIC18.43■□□□□ 0.54
CHRM1P11229 AL591684.3-201ENST00000605187 298 ntBASIC18.43■□□□□ 0.54
CHRM1P11229 AC009118.3-201ENST00000622896 873 ntBASIC18.43■□□□□ 0.54
CHRM1P11229 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRM1P11229 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHRM1P11229 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRM1P11229 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.43■□□□□ 0.54
CHRM1P11229 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHRM1P11229 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRM1P11229 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.43■□□□□ 0.54
CHRM1P11229 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRM1P11229 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRM1P11229 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRM1P11229 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRM1P11229 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHRM1P11229 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHRM1P11229 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CHRM1P11229 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHRM1P11229 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.42■□□□□ 0.54
CHRM1P11229 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRM1P11229 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRM1P11229 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRM1P11229 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms