Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RARAP10276 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
RARAP10276 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.4■□□□□ 0.54
RARAP10276 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.4■□□□□ 0.54
RARAP10276 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RARAP10276 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RARAP10276 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RARAP10276 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RARAP10276 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RARAP10276 AC016734.2-201ENST00000624325 1377 ntBASIC18.4■□□□□ 0.54
RARAP10276 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RARAP10276 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RARAP10276 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RARAP10276 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RARAP10276 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RARAP10276 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
RARAP10276 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RARAP10276 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.39■□□□□ 0.54
RARAP10276 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RARAP10276 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RARAP10276 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RARAP10276 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RARAP10276 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RARAP10276 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RARAP10276 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RARAP10276 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
RARAP10276 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RARAP10276 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RARAP10276 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RARAP10276 PCED1CP-201ENST00000419887 785 ntBASIC18.39■□□□□ 0.53
RARAP10276 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RARAP10276 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.39■□□□□ 0.53
RARAP10276 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RARAP10276 BX276092.5-203ENST00000456199 560 ntBASIC18.39■□□□□ 0.53
RARAP10276 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RARAP10276 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.39■□□□□ 0.53
RARAP10276 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.39■□□□□ 0.53
RARAP10276 AC005336.2-201ENST00000593183 939 ntBASIC18.39■□□□□ 0.53
RARAP10276 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.39■□□□□ 0.53
RARAP10276 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RARAP10276 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RARAP10276 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RARAP10276 AC125634.1-201ENST00000438758 1403 ntBASIC18.39■□□□□ 0.53
RARAP10276 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RARAP10276 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RARAP10276 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RARAP10276 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RARAP10276 LYSMD4-203ENST00000378904 2122 ntBASIC18.38■□□□□ 0.53
RARAP10276 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RARAP10276 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RARAP10276 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RARAP10276 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.38■□□□□ 0.53
RARAP10276 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RARAP10276 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RARAP10276 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RARAP10276 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RARAP10276 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RARAP10276 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RARAP10276 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RARAP10276 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RARAP10276 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RARAP10276 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RARAP10276 COX5BP2-201ENST00000392354 334 ntBASIC18.38■□□□□ 0.53
RARAP10276 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RARAP10276 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RARAP10276 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.38■□□□□ 0.53
RARAP10276 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.38■□□□□ 0.53
RARAP10276 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RARAP10276 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.38■□□□□ 0.53
RARAP10276 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RARAP10276 AL121672.3-201ENST00000608644 468 ntBASIC18.38■□□□□ 0.53
RARAP10276 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RARAP10276 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.38■□□□□ 0.53
RARAP10276 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RARAP10276 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.38■□□□□ 0.53
RARAP10276 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RARAP10276 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RARAP10276 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.38■□□□□ 0.53
RARAP10276 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RARAP10276 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RARAP10276 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RARAP10276 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RARAP10276 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.37■□□□□ 0.53
RARAP10276 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RARAP10276 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RARAP10276 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RARAP10276 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RARAP10276 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.37■□□□□ 0.53
RARAP10276 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RARAP10276 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.37■□□□□ 0.53
RARAP10276 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RARAP10276 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RARAP10276 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RARAP10276 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RARAP10276 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RARAP10276 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RARAP10276 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
RARAP10276 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.37■□□□□ 0.53
RARAP10276 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RARAP10276 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms