Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.31■□□□□ 0.2
HNRNPCL4P0DMR1 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HNRNPCL4P0DMR1 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HNRNPCL4P0DMR1 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HNRNPCL4P0DMR1 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 AC010460.3-201ENST00000511359 1579 ntBASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 MYCLP1-201ENST00000372451 1075 ntBASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 AL645929.1-201ENST00000420084 975 ntBASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 AL671277.2-201ENST00000458060 996 ntBASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 AC009053.2-201ENST00000563701 2365 ntBASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 PCDHA12-202ENST00000613593 2588 ntBASIC16.3■□□□□ 0.2
HNRNPCL4P0DMR1 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HNRNPCL4P0DMR1 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HNRNPCL4P0DMR1 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HNRNPCL4P0DMR1 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.29■□□□□ 0.2
HNRNPCL4P0DMR1 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HNRNPCL4P0DMR1 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HNRNPCL4P0DMR1 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HNRNPCL4P0DMR1 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HNRNPCL4P0DMR1 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HNRNPCL4P0DMR1 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.29■□□□□ 0.2
HNRNPCL4P0DMR1 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
HNRNPCL4P0DMR1 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HNRNPCL4P0DMR1 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.29■□□□□ 0.2
HNRNPCL4P0DMR1 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.29■□□□□ 0.2
HNRNPCL4P0DMR1 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
HNRNPCL4P0DMR1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.29■□□□□ 0.2
HNRNPCL4P0DMR1 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HNRNPCL4P0DMR1 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HNRNPCL4P0DMR1 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HNRNPCL4P0DMR1 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HNRNPCL4P0DMR1 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
HNRNPCL4P0DMR1 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HNRNPCL4P0DMR1 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HNRNPCL4P0DMR1 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HNRNPCL4P0DMR1 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HNRNPCL4P0DMR1 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HNRNPCL4P0DMR1 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HNRNPCL4P0DMR1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.29■□□□□ 0.2
HNRNPCL4P0DMR1 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
HNRNPCL4P0DMR1 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HNRNPCL4P0DMR1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HNRNPCL4P0DMR1 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HNRNPCL4P0DMR1 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HNRNPCL4P0DMR1 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HNRNPCL4P0DMR1 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
HNRNPCL4P0DMR1 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HNRNPCL4P0DMR1 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HNRNPCL4P0DMR1 AC116353.5-201ENST00000638148 1699 ntBASIC16.28■□□□□ 0.2
HNRNPCL4P0DMR1 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HNRNPCL4P0DMR1 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HNRNPCL4P0DMR1 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HNRNPCL4P0DMR1 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HNRNPCL4P0DMR1 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HNRNPCL4P0DMR1 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HNRNPCL4P0DMR1 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HNRNPCL4P0DMR1 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HNRNPCL4P0DMR1 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HNRNPCL4P0DMR1 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms