Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CXCL1P09341 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CXCL1P09341 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CXCL1P09341 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL1P09341 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CXCL1P09341 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC13.62□□□□□ -0.23
CXCL1P09341 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CXCL1P09341 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL1P09341 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
CXCL1P09341 AC078925.2-201ENST00000624013 1973 ntBASIC13.62□□□□□ -0.23
CXCL1P09341 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL1P09341 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL1P09341 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL1P09341 HLA-J-201ENST00000462773 1622 ntBASIC13.62□□□□□ -0.23
CXCL1P09341 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC13.62□□□□□ -0.23
CXCL1P09341 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL1P09341 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL1P09341 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL1P09341 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL1P09341 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL1P09341 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CXCL1P09341 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL1P09341 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC13.62□□□□□ -0.23
CXCL1P09341 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC13.62□□□□□ -0.23
CXCL1P09341 AC083880.1-201ENST00000608266 535 ntBASIC13.62□□□□□ -0.23
CXCL1P09341 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CXCL1P09341 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
CXCL1P09341 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.62□□□□□ -0.23
CXCL1P09341 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL1P09341 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL1P09341 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL1P09341 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.62□□□□□ -0.23
CXCL1P09341 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CXCL1P09341 AC092364.2-201ENST00000596710 2692 ntBASIC13.62□□□□□ -0.23
CXCL1P09341 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.62□□□□□ -0.23
CXCL1P09341 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL1P09341 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.62□□□□□ -0.23
CXCL1P09341 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL1P09341 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL1P09341 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL1P09341 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.62□□□□□ -0.23
CXCL1P09341 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL1P09341 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL1P09341 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CXCL1P09341 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL1P09341 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL1P09341 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL1P09341 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL1P09341 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.61□□□□□ -0.23
CXCL1P09341 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL1P09341 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL1P09341 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL1P09341 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.61□□□□□ -0.23
CXCL1P09341 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL1P09341 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL1P09341 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL1P09341 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CXCL1P09341 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL1P09341 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL1P09341 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC13.61□□□□□ -0.23
CXCL1P09341 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL1P09341 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL1P09341 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL1P09341 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
CXCL1P09341 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL1P09341 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC13.61□□□□□ -0.23
CXCL1P09341 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC13.61□□□□□ -0.23
CXCL1P09341 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC13.61□□□□□ -0.23
CXCL1P09341 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL1P09341 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC13.61□□□□□ -0.23
CXCL1P09341 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC13.61□□□□□ -0.23
CXCL1P09341 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC13.61□□□□□ -0.23
CXCL1P09341 AL445675.2-201ENST00000620291 557 ntBASIC13.61□□□□□ -0.23
CXCL1P09341 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL1P09341 PFKL-212ENST00000628044 129 ntTSL 3 BASIC13.61□□□□□ -0.23
CXCL1P09341 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.61□□□□□ -0.23
CXCL1P09341 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL1P09341 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL1P09341 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL1P09341 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL1P09341 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
CXCL1P09341 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL1P09341 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC13.61□□□□□ -0.23
CXCL1P09341 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CXCL1P09341 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL1P09341 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CXCL1P09341 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL1P09341 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL1P09341 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.61□□□□□ -0.23
CXCL1P09341 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC13.61□□□□□ -0.23
CXCL1P09341 AC093010.1-201ENST00000473625 1624 ntBASIC13.61□□□□□ -0.23
CXCL1P09341 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCL1P09341 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.6□□□□□ -0.23
CXCL1P09341 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC13.6□□□□□ -0.23
CXCL1P09341 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCL1P09341 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCL1P09341 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CXCL1P09341 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC13.6□□□□□ -0.23
CXCL1P09341 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCL1P09341 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms