Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTSBP07858 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
CTSBP07858 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CTSBP07858 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CTSBP07858 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CTSBP07858 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTSBP07858 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CTSBP07858 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CTSBP07858 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTSBP07858 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.57■□□□□ 0.24
CTSBP07858 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.57■□□□□ 0.24
CTSBP07858 LINC00982-205ENST00000420957 435 ntBASIC16.57■□□□□ 0.24
CTSBP07858 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.57■□□□□ 0.24
CTSBP07858 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.57■□□□□ 0.24
CTSBP07858 POLD2P1-201ENST00000511220 997 ntBASIC16.57■□□□□ 0.24
CTSBP07858 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.57■□□□□ 0.24
CTSBP07858 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.57■□□□□ 0.24
CTSBP07858 AC034105.1-201ENST00000563488 319 ntBASIC16.57■□□□□ 0.24
CTSBP07858 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.57■□□□□ 0.24
CTSBP07858 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CTSBP07858 AL139327.4-201ENST00000612362 153 ntBASIC16.57■□□□□ 0.24
CTSBP07858 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
CTSBP07858 AL589182.2-201ENST00000619332 1049 ntBASIC16.57■□□□□ 0.24
CTSBP07858 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
CTSBP07858 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.57■□□□□ 0.24
CTSBP07858 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTSBP07858 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CTSBP07858 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTSBP07858 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTSBP07858 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CTSBP07858 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTSBP07858 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.56■□□□□ 0.24
CTSBP07858 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CTSBP07858 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.56■□□□□ 0.24
CTSBP07858 AC046185.3-201ENST00000623228 1824 ntBASIC16.56■□□□□ 0.24
CTSBP07858 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTSBP07858 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.56■□□□□ 0.24
CTSBP07858 AL135999.2-201ENST00000622438 1686 ntBASIC16.56■□□□□ 0.24
CTSBP07858 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CTSBP07858 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CTSBP07858 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
CTSBP07858 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CTSBP07858 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CTSBP07858 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTSBP07858 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTSBP07858 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
CTSBP07858 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.56■□□□□ 0.24
CTSBP07858 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTSBP07858 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
CTSBP07858 LINC01451-201ENST00000623792 534 ntBASIC16.56■□□□□ 0.24
CTSBP07858 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.56■□□□□ 0.24
CTSBP07858 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTSBP07858 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CTSBP07858 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CTSBP07858 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTSBP07858 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.56■□□□□ 0.24
CTSBP07858 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CTSBP07858 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CTSBP07858 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CTSBP07858 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.55■□□□□ 0.24
CTSBP07858 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSBP07858 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.55■□□□□ 0.24
CTSBP07858 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSBP07858 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSBP07858 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSBP07858 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSBP07858 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.55■□□□□ 0.24
CTSBP07858 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSBP07858 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CTSBP07858 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSBP07858 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.55■□□□□ 0.24
CTSBP07858 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CTSBP07858 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.55■□□□□ 0.24
CTSBP07858 AC009947.1-201ENST00000444350 727 ntBASIC16.55■□□□□ 0.24
CTSBP07858 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.55■□□□□ 0.24
CTSBP07858 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.55■□□□□ 0.24
CTSBP07858 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.55■□□□□ 0.24
CTSBP07858 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CTSBP07858 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSBP07858 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CTSBP07858 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.55■□□□□ 0.24
CTSBP07858 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSBP07858 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSBP07858 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.55■□□□□ 0.24
CTSBP07858 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSBP07858 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.55■□□□□ 0.24
CTSBP07858 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CTSBP07858 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTSBP07858 NCF1C-201ENST00000438382 1427 ntBASIC16.54■□□□□ 0.24
CTSBP07858 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.54■□□□□ 0.24
CTSBP07858 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTSBP07858 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CTSBP07858 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTSBP07858 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CTSBP07858 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CTSBP07858 AC133963.1-201ENST00000504166 1679 ntBASIC16.54■□□□□ 0.24
CTSBP07858 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTSBP07858 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CTSBP07858 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTSBP07858 MYCLP1-201ENST00000372451 1075 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms