Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.76□□□□□ -0.05
CD74P04233 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD74P04233 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD74P04233 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.76□□□□□ -0.05
CD74P04233 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.76□□□□□ -0.05
CD74P04233 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CD74P04233 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD74P04233 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.76□□□□□ -0.05
CD74P04233 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CD74P04233 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD74P04233 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CD74P04233 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD74P04233 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD74P04233 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD74P04233 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CD74P04233 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD74P04233 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD74P04233 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD74P04233 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CD74P04233 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.75□□□□□ -0.05
CD74P04233 AC092171.3-201ENST00000610122 2651 ntBASIC14.75□□□□□ -0.05
CD74P04233 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CD74P04233 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD74P04233 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CD74P04233 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD74P04233 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CD74P04233 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.75□□□□□ -0.05
CD74P04233 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD74P04233 AL355802.2-201ENST00000402069 882 ntBASIC14.75□□□□□ -0.05
CD74P04233 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC14.75□□□□□ -0.05
CD74P04233 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.75□□□□□ -0.05
CD74P04233 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.75□□□□□ -0.05
CD74P04233 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC14.75□□□□□ -0.05
CD74P04233 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CD74P04233 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CD74P04233 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CD74P04233 AC124947.2-201ENST00000547118 1133 ntBASIC14.75□□□□□ -0.05
CD74P04233 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.75□□□□□ -0.05
CD74P04233 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CD74P04233 AC008741.2-201ENST00000612792 3115 ntBASIC14.75□□□□□ -0.05
CD74P04233 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CD74P04233 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.75□□□□□ -0.05
CD74P04233 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CD74P04233 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD74P04233 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD74P04233 AC092338.2-201ENST00000568827 1415 ntBASIC14.75□□□□□ -0.05
CD74P04233 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC14.75□□□□□ -0.05
CD74P04233 AL135905.2-201ENST00000584934 1404 ntBASIC14.75□□□□□ -0.05
CD74P04233 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD74P04233 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD74P04233 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD74P04233 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD74P04233 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.74□□□□□ -0.05
CD74P04233 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD74P04233 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.74□□□□□ -0.05
CD74P04233 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.74□□□□□ -0.05
CD74P04233 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.74□□□□□ -0.05
CD74P04233 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CD74P04233 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.74□□□□□ -0.05
CD74P04233 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD74P04233 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CD74P04233 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD74P04233 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.74□□□□□ -0.05
CD74P04233 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
CD74P04233 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD74P04233 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD74P04233 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD74P04233 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CD74P04233 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.74□□□□□ -0.05
CD74P04233 AC007950.2-201ENST00000615045 2347 ntBASIC14.74□□□□□ -0.05
CD74P04233 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CD74P04233 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD74P04233 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD74P04233 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.74□□□□□ -0.05
CD74P04233 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.74□□□□□ -0.05
CD74P04233 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.74□□□□□ -0.05
CD74P04233 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.74□□□□□ -0.05
CD74P04233 APTR-205ENST00000447009 902 ntTSL 2 BASIC14.74□□□□□ -0.05
CD74P04233 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC14.74□□□□□ -0.05
CD74P04233 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD74P04233 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
CD74P04233 GRAP-204ENST00000573099 846 ntTSL 3 BASIC14.74□□□□□ -0.05
CD74P04233 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.74□□□□□ -0.05
CD74P04233 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.74□□□□□ -0.05
CD74P04233 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.74□□□□□ -0.05
CD74P04233 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD74P04233 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
CD74P04233 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CD74P04233 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD74P04233 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD74P04233 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CD74P04233 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD74P04233 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.74□□□□□ -0.05
CD74P04233 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.74□□□□□ -0.05
CD74P04233 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.74□□□□□ -0.05
CD74P04233 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CD74P04233 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
CD74P04233 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.74□□□□□ -0.05
CD74P04233 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD74P04233 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms