Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.56■□□□□ 0.4
TRBC1P01850 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.56■□□□□ 0.4
TRBC1P01850 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.56■□□□□ 0.4
TRBC1P01850 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.56■□□□□ 0.4
TRBC1P01850 AL121912.1-201ENST00000603683 238 ntBASIC17.56■□□□□ 0.4
TRBC1P01850 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.56■□□□□ 0.4
TRBC1P01850 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
TRBC1P01850 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBC1P01850 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.56■□□□□ 0.4
TRBC1P01850 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TRBC1P01850 AC009336.1-201ENST00000608941 1553 ntBASIC17.56■□□□□ 0.4
TRBC1P01850 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBC1P01850 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBC1P01850 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBC1P01850 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBC1P01850 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRBC1P01850 LINC00896-202ENST00000609602 2128 ntBASIC17.56■□□□□ 0.4
TRBC1P01850 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBC1P01850 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBC1P01850 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRBC1P01850 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBC1P01850 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBC1P01850 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.55■□□□□ 0.4
TRBC1P01850 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.55■□□□□ 0.4
TRBC1P01850 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRBC1P01850 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBC1P01850 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBC1P01850 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.55■□□□□ 0.4
TRBC1P01850 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBC1P01850 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRBC1P01850 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.55■□□□□ 0.4
TRBC1P01850 AL356309.3-201ENST00000624132 1934 ntBASIC17.55■□□□□ 0.4
TRBC1P01850 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBC1P01850 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBC1P01850 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.55■□□□□ 0.4
TRBC1P01850 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRBC1P01850 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBC1P01850 AL020989.1-201ENST00000422979 469 ntBASIC17.55■□□□□ 0.4
TRBC1P01850 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
TRBC1P01850 AC079781.3-201ENST00000449110 356 ntBASIC17.55■□□□□ 0.4
TRBC1P01850 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBC1P01850 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
TRBC1P01850 AL139288.1-201ENST00000623748 933 ntBASIC17.55■□□□□ 0.4
TRBC1P01850 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBC1P01850 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBC1P01850 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRBC1P01850 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.55■□□□□ 0.4
TRBC1P01850 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.55■□□□□ 0.4
TRBC1P01850 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRBC1P01850 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBC1P01850 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBC1P01850 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRBC1P01850 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
TRBC1P01850 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBC1P01850 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBC1P01850 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBC1P01850 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TRBC1P01850 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRBC1P01850 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBC1P01850 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.54■□□□□ 0.4
TRBC1P01850 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBC1P01850 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.54■□□□□ 0.4
TRBC1P01850 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRBC1P01850 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.54■□□□□ 0.4
TRBC1P01850 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TRBC1P01850 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRBC1P01850 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBC1P01850 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBC1P01850 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.54■□□□□ 0.4
TRBC1P01850 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.54■□□□□ 0.4
TRBC1P01850 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.54■□□□□ 0.4
TRBC1P01850 AL031008.1-201ENST00000619963 541 ntBASIC17.54■□□□□ 0.4
TRBC1P01850 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.54■□□□□ 0.4
TRBC1P01850 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRBC1P01850 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBC1P01850 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.54■□□□□ 0.4
TRBC1P01850 LETM1P2-201ENST00000597330 2178 ntBASIC17.54■□□□□ 0.4
TRBC1P01850 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBC1P01850 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBC1P01850 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBC1P01850 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBC1P01850 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBC1P01850 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRBC1P01850 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBC1P01850 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.54■□□□□ 0.4
TRBC1P01850 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.54■□□□□ 0.4
TRBC1P01850 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBC1P01850 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRBC1P01850 AC148477.5-201ENST00000625164 1645 ntBASIC17.54■□□□□ 0.4
TRBC1P01850 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBC1P01850 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBC1P01850 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRBC1P01850 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
TRBC1P01850 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
TRBC1P01850 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBC1P01850 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRBC1P01850 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TRBC1P01850 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBC1P01850 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBC1P01850 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms