Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ALDH1A1P00352 KRT17P7-201ENST00000451704 1104 ntBASIC19.83■□□□□ 0.77
ALDH1A1P00352 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ALDH1A1P00352 AC022494.1-201ENST00000466044 728 ntBASIC19.83■□□□□ 0.77
ALDH1A1P00352 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.83■□□□□ 0.77
ALDH1A1P00352 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.83■□□□□ 0.77
ALDH1A1P00352 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.83■□□□□ 0.77
ALDH1A1P00352 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
ALDH1A1P00352 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.83■□□□□ 0.77
ALDH1A1P00352 MIR6080-201ENST00000617359 66 ntBASIC19.83■□□□□ 0.77
ALDH1A1P00352 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ALDH1A1P00352 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
ALDH1A1P00352 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ALDH1A1P00352 CU639417.3-201ENST00000624240 1404 ntBASIC19.83■□□□□ 0.76
ALDH1A1P00352 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.83■□□□□ 0.76
ALDH1A1P00352 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.83■□□□□ 0.76
ALDH1A1P00352 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ALDH1A1P00352 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ALDH1A1P00352 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ALDH1A1P00352 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ALDH1A1P00352 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.82■□□□□ 0.76
ALDH1A1P00352 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ALDH1A1P00352 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ALDH1A1P00352 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ALDH1A1P00352 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.82■□□□□ 0.76
ALDH1A1P00352 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ALDH1A1P00352 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
ALDH1A1P00352 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
ALDH1A1P00352 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ALDH1A1P00352 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.82■□□□□ 0.76
ALDH1A1P00352 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.82■□□□□ 0.76
ALDH1A1P00352 AC004890.2-204ENST00000481968 304 ntBASIC19.82■□□□□ 0.76
ALDH1A1P00352 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC19.82■□□□□ 0.76
ALDH1A1P00352 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.82■□□□□ 0.76
ALDH1A1P00352 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
ALDH1A1P00352 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.82■□□□□ 0.76
ALDH1A1P00352 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.82■□□□□ 0.76
ALDH1A1P00352 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.82■□□□□ 0.76
ALDH1A1P00352 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ALDH1A1P00352 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.82■□□□□ 0.76
ALDH1A1P00352 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ALDH1A1P00352 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.82■□□□□ 0.76
ALDH1A1P00352 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ALDH1A1P00352 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ALDH1A1P00352 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ALDH1A1P00352 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
ALDH1A1P00352 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ALDH1A1P00352 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ALDH1A1P00352 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ALDH1A1P00352 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ALDH1A1P00352 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ALDH1A1P00352 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC19.81■□□□□ 0.76
ALDH1A1P00352 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.81■□□□□ 0.76
ALDH1A1P00352 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC19.81■□□□□ 0.76
ALDH1A1P00352 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.81■□□□□ 0.76
ALDH1A1P00352 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ALDH1A1P00352 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ALDH1A1P00352 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ALDH1A1P00352 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.81■□□□□ 0.76
ALDH1A1P00352 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC19.81■□□□□ 0.76
ALDH1A1P00352 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ALDH1A1P00352 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ALDH1A1P00352 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.81■□□□□ 0.76
ALDH1A1P00352 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ALDH1A1P00352 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC19.81■□□□□ 0.76
ALDH1A1P00352 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.81■□□□□ 0.76
ALDH1A1P00352 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.81■□□□□ 0.76
ALDH1A1P00352 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ALDH1A1P00352 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC19.81■□□□□ 0.76
ALDH1A1P00352 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ALDH1A1P00352 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.81■□□□□ 0.76
ALDH1A1P00352 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
ALDH1A1P00352 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ALDH1A1P00352 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ALDH1A1P00352 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
ALDH1A1P00352 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ALDH1A1P00352 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ALDH1A1P00352 AC009949.1-201ENST00000623048 1830 ntBASIC19.81■□□□□ 0.76
ALDH1A1P00352 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.81■□□□□ 0.76
ALDH1A1P00352 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALDH1A1P00352 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ALDH1A1P00352 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALDH1A1P00352 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ALDH1A1P00352 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALDH1A1P00352 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ALDH1A1P00352 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALDH1A1P00352 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALDH1A1P00352 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALDH1A1P00352 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALDH1A1P00352 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ALDH1A1P00352 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALDH1A1P00352 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALDH1A1P00352 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ALDH1A1P00352 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC19.8■□□□□ 0.76
ALDH1A1P00352 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ALDH1A1P00352 AC092580.3-201ENST00000430932 139 ntBASIC19.8■□□□□ 0.76
ALDH1A1P00352 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.8■□□□□ 0.76
ALDH1A1P00352 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19.8■□□□□ 0.76
ALDH1A1P00352 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.8■□□□□ 0.76
ALDH1A1P00352 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms