Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TSPAN3O60637 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TSPAN3O60637 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TSPAN3O60637 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TSPAN3O60637 AL133373.2-201ENST00000623187 2828 ntBASIC18.08■□□□□ 0.48
TSPAN3O60637 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TSPAN3O60637 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TSPAN3O60637 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TSPAN3O60637 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TSPAN3O60637 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TSPAN3O60637 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.07■□□□□ 0.48
TSPAN3O60637 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.07■□□□□ 0.48
TSPAN3O60637 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.07■□□□□ 0.48
TSPAN3O60637 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.07■□□□□ 0.48
TSPAN3O60637 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.07■□□□□ 0.48
TSPAN3O60637 STK19B-204ENST00000512515 211 ntBASIC18.07■□□□□ 0.48
TSPAN3O60637 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TSPAN3O60637 AC139887.3-201ENST00000568585 713 ntBASIC18.07■□□□□ 0.48
TSPAN3O60637 BX640515.1-201ENST00000617215 977 ntBASIC18.07■□□□□ 0.48
TSPAN3O60637 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.07■□□□□ 0.48
TSPAN3O60637 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
TSPAN3O60637 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TSPAN3O60637 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.07■□□□□ 0.48
TSPAN3O60637 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TSPAN3O60637 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TSPAN3O60637 REXO1L11P-201ENST00000620964 1927 ntBASIC18.07■□□□□ 0.48
TSPAN3O60637 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TSPAN3O60637 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TSPAN3O60637 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TSPAN3O60637 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TSPAN3O60637 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TSPAN3O60637 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.07■□□□□ 0.48
TSPAN3O60637 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.06■□□□□ 0.48
TSPAN3O60637 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TSPAN3O60637 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TSPAN3O60637 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TSPAN3O60637 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TSPAN3O60637 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.06■□□□□ 0.48
TSPAN3O60637 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TSPAN3O60637 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.06■□□□□ 0.48
TSPAN3O60637 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TSPAN3O60637 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TSPAN3O60637 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TSPAN3O60637 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TSPAN3O60637 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.06■□□□□ 0.48
TSPAN3O60637 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TSPAN3O60637 AC092910.1-201ENST00000482027 1129 ntBASIC18.06■□□□□ 0.48
TSPAN3O60637 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.06■□□□□ 0.48
TSPAN3O60637 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.06■□□□□ 0.48
TSPAN3O60637 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.06■□□□□ 0.48
TSPAN3O60637 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.06■□□□□ 0.48
TSPAN3O60637 SLC25A1P1-201ENST00000528351 927 ntBASIC18.06■□□□□ 0.48
TSPAN3O60637 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.06■□□□□ 0.48
TSPAN3O60637 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.06■□□□□ 0.48
TSPAN3O60637 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.06■□□□□ 0.48
TSPAN3O60637 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TSPAN3O60637 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TSPAN3O60637 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TSPAN3O60637 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.06■□□□□ 0.48
TSPAN3O60637 AC073592.4-201ENST00000623827 446 ntBASIC18.06■□□□□ 0.48
TSPAN3O60637 AF228730.7-201ENST00000641842 219 ntBASIC18.06■□□□□ 0.48
TSPAN3O60637 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TSPAN3O60637 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TSPAN3O60637 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TSPAN3O60637 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TSPAN3O60637 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TSPAN3O60637 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.06■□□□□ 0.48
TSPAN3O60637 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TSPAN3O60637 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.06■□□□□ 0.48
TSPAN3O60637 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TSPAN3O60637 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TSPAN3O60637 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TSPAN3O60637 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TSPAN3O60637 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TSPAN3O60637 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
TSPAN3O60637 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TSPAN3O60637 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TSPAN3O60637 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TSPAN3O60637 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TSPAN3O60637 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TSPAN3O60637 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.05■□□□□ 0.48
TSPAN3O60637 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.05■□□□□ 0.48
TSPAN3O60637 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TSPAN3O60637 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TSPAN3O60637 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TSPAN3O60637 AC003669.1-201ENST00000334569 611 ntBASIC18.05■□□□□ 0.48
TSPAN3O60637 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TSPAN3O60637 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TSPAN3O60637 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.05■□□□□ 0.48
TSPAN3O60637 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.05■□□□□ 0.48
TSPAN3O60637 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.05■□□□□ 0.48
TSPAN3O60637 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.05■□□□□ 0.48
TSPAN3O60637 STK25P1-201ENST00000585406 838 ntBASIC18.05■□□□□ 0.48
TSPAN3O60637 AC107918.4-202ENST00000641623 219 ntBASIC18.05■□□□□ 0.48
TSPAN3O60637 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TSPAN3O60637 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
TSPAN3O60637 SIGLEC16-201ENST00000599858 1437 ntBASIC18.05■□□□□ 0.48
TSPAN3O60637 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TSPAN3O60637 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TSPAN3O60637 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms