Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GFRA3O60609 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GFRA3O60609 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.86■□□□□ 0.29
GFRA3O60609 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GFRA3O60609 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
GFRA3O60609 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
GFRA3O60609 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GFRA3O60609 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GFRA3O60609 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GFRA3O60609 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
GFRA3O60609 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GFRA3O60609 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.85■□□□□ 0.29
GFRA3O60609 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.85■□□□□ 0.29
GFRA3O60609 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.85■□□□□ 0.29
GFRA3O60609 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GFRA3O60609 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GFRA3O60609 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GFRA3O60609 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GFRA3O60609 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
GFRA3O60609 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GFRA3O60609 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.85■□□□□ 0.29
GFRA3O60609 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.85■□□□□ 0.29
GFRA3O60609 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.85■□□□□ 0.29
GFRA3O60609 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
GFRA3O60609 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.85■□□□□ 0.29
GFRA3O60609 STK25P1-201ENST00000585406 838 ntBASIC16.85■□□□□ 0.29
GFRA3O60609 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.85■□□□□ 0.29
GFRA3O60609 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.85■□□□□ 0.29
GFRA3O60609 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.85■□□□□ 0.29
GFRA3O60609 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.85■□□□□ 0.29
GFRA3O60609 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.85■□□□□ 0.29
GFRA3O60609 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC16.85■□□□□ 0.29
GFRA3O60609 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.85■□□□□ 0.29
GFRA3O60609 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.85■□□□□ 0.29
GFRA3O60609 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
GFRA3O60609 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
GFRA3O60609 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
GFRA3O60609 AL391825.1-201ENST00000457671 1364 ntBASIC16.85■□□□□ 0.29
GFRA3O60609 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
GFRA3O60609 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GFRA3O60609 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GFRA3O60609 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.85■□□□□ 0.29
GFRA3O60609 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
GFRA3O60609 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
GFRA3O60609 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
GFRA3O60609 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.85■□□□□ 0.29
GFRA3O60609 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
GFRA3O60609 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.84■□□□□ 0.29
GFRA3O60609 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
GFRA3O60609 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.84■□□□□ 0.29
GFRA3O60609 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
GFRA3O60609 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
GFRA3O60609 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GFRA3O60609 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GFRA3O60609 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GFRA3O60609 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GFRA3O60609 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.84■□□□□ 0.29
GFRA3O60609 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
GFRA3O60609 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
GFRA3O60609 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GFRA3O60609 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.84■□□□□ 0.29
GFRA3O60609 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.84■□□□□ 0.29
GFRA3O60609 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
GFRA3O60609 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
GFRA3O60609 WASH4P-201ENST00000564273 1246 ntBASIC16.84■□□□□ 0.29
GFRA3O60609 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GFRA3O60609 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.84■□□□□ 0.29
GFRA3O60609 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
GFRA3O60609 AL590787.1-201ENST00000568856 1315 ntBASIC16.84■□□□□ 0.29
GFRA3O60609 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.84■□□□□ 0.29
GFRA3O60609 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GFRA3O60609 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
GFRA3O60609 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.84■□□□□ 0.29
GFRA3O60609 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
GFRA3O60609 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.84■□□□□ 0.29
GFRA3O60609 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.84■□□□□ 0.29
GFRA3O60609 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
GFRA3O60609 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GFRA3O60609 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GFRA3O60609 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.84■□□□□ 0.29
GFRA3O60609 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GFRA3O60609 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
GFRA3O60609 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GFRA3O60609 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GFRA3O60609 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
GFRA3O60609 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
GFRA3O60609 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GFRA3O60609 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
GFRA3O60609 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
GFRA3O60609 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.83■□□□□ 0.28
GFRA3O60609 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GFRA3O60609 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
GFRA3O60609 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GFRA3O60609 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
GFRA3O60609 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GFRA3O60609 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.83■□□□□ 0.28
GFRA3O60609 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GFRA3O60609 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.83■□□□□ 0.28
GFRA3O60609 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GFRA3O60609 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms