Protein–RNA interactions for Protein: O60488

ACSL4, Long-chain-fatty-acid--CoA ligase 4, humanhuman

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACSL4O60488 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ACSL4O60488 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.03■□□□□ 0.48
ACSL4O60488 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.03■□□□□ 0.48
ACSL4O60488 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.03■□□□□ 0.48
ACSL4O60488 AC012640.2-201ENST00000561606 901 ntBASIC18.03■□□□□ 0.48
ACSL4O60488 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.03■□□□□ 0.48
ACSL4O60488 AC139887.3-201ENST00000568585 713 ntBASIC18.03■□□□□ 0.48
ACSL4O60488 AC008735.5-201ENST00000623544 497 ntBASIC18.03■□□□□ 0.48
ACSL4O60488 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
ACSL4O60488 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.03■□□□□ 0.48
ACSL4O60488 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
ACSL4O60488 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ACSL4O60488 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.03■□□□□ 0.48
ACSL4O60488 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ACSL4O60488 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
ACSL4O60488 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ACSL4O60488 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.03■□□□□ 0.48
ACSL4O60488 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ACSL4O60488 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ACSL4O60488 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.03■□□□□ 0.48
ACSL4O60488 AC133963.1-201ENST00000504166 1679 ntBASIC18.03■□□□□ 0.48
ACSL4O60488 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.02■□□□□ 0.48
ACSL4O60488 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ACSL4O60488 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ACSL4O60488 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ACSL4O60488 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.02■□□□□ 0.48
ACSL4O60488 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.02■□□□□ 0.48
ACSL4O60488 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.02■□□□□ 0.48
ACSL4O60488 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ACSL4O60488 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ACSL4O60488 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ACSL4O60488 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.02■□□□□ 0.48
ACSL4O60488 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ACSL4O60488 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
ACSL4O60488 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
ACSL4O60488 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
ACSL4O60488 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ACSL4O60488 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ACSL4O60488 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.02■□□□□ 0.48
ACSL4O60488 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.02■□□□□ 0.48
ACSL4O60488 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.02■□□□□ 0.48
ACSL4O60488 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.02■□□□□ 0.48
ACSL4O60488 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
ACSL4O60488 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.02■□□□□ 0.48
ACSL4O60488 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.02■□□□□ 0.48
ACSL4O60488 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.02■□□□□ 0.48
ACSL4O60488 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
ACSL4O60488 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.02■□□□□ 0.48
ACSL4O60488 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.02■□□□□ 0.48
ACSL4O60488 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.02■□□□□ 0.48
ACSL4O60488 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.02■□□□□ 0.48
ACSL4O60488 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.02■□□□□ 0.48
ACSL4O60488 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
ACSL4O60488 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.02■□□□□ 0.48
ACSL4O60488 BX640515.1-201ENST00000617215 977 ntBASIC18.02■□□□□ 0.48
ACSL4O60488 AL589182.2-201ENST00000619332 1049 ntBASIC18.02■□□□□ 0.48
ACSL4O60488 AC116407.3-201ENST00000623905 1129 ntBASIC18.02■□□□□ 0.48
ACSL4O60488 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ACSL4O60488 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ACSL4O60488 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ACSL4O60488 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ACSL4O60488 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ACSL4O60488 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.02■□□□□ 0.47
ACSL4O60488 AC243591.1-201ENST00000452967 1364 ntBASIC18.02■□□□□ 0.47
ACSL4O60488 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
ACSL4O60488 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ACSL4O60488 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.02■□□□□ 0.47
ACSL4O60488 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ACSL4O60488 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.01■□□□□ 0.47
ACSL4O60488 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ACSL4O60488 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ACSL4O60488 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.01■□□□□ 0.47
ACSL4O60488 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
ACSL4O60488 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.01■□□□□ 0.47
ACSL4O60488 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
ACSL4O60488 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
ACSL4O60488 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ACSL4O60488 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.01■□□□□ 0.47
ACSL4O60488 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ACSL4O60488 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.01■□□□□ 0.47
ACSL4O60488 AL590627.1-203ENST00000421194 1026 ntBASIC18.01■□□□□ 0.47
ACSL4O60488 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.01■□□□□ 0.47
ACSL4O60488 AC105339.3-201ENST00000560043 636 ntBASIC18.01■□□□□ 0.47
ACSL4O60488 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.01■□□□□ 0.47
ACSL4O60488 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.01■□□□□ 0.47
ACSL4O60488 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.01■□□□□ 0.47
ACSL4O60488 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.01■□□□□ 0.47
ACSL4O60488 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ACSL4O60488 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.01■□□□□ 0.47
ACSL4O60488 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
ACSL4O60488 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ACSL4O60488 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
ACSL4O60488 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ACSL4O60488 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
ACSL4O60488 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.01■□□□□ 0.47
ACSL4O60488 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ACSL4O60488 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
ACSL4O60488 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ACSL4O60488 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ACSL4O60488 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms