Protein–RNA interactions for Protein: O60393

NOBOX, Homeobox protein NOBOX, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOBOXO60393 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NOBOXO60393 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.37■□□□□ 0.37
NOBOXO60393 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NOBOXO60393 GNAS-203ENST00000306120 1878 ntBASIC17.37■□□□□ 0.37
NOBOXO60393 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.37■□□□□ 0.37
NOBOXO60393 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NOBOXO60393 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NOBOXO60393 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NOBOXO60393 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.37■□□□□ 0.37
NOBOXO60393 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.37■□□□□ 0.37
NOBOXO60393 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
NOBOXO60393 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NOBOXO60393 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NOBOXO60393 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NOBOXO60393 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NOBOXO60393 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.37■□□□□ 0.37
NOBOXO60393 PMS2P1-201ENST00000431037 1228 ntBASIC17.37■□□□□ 0.37
NOBOXO60393 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.37■□□□□ 0.37
NOBOXO60393 HNRNPDP1-201ENST00000439535 754 ntBASIC17.37■□□□□ 0.37
NOBOXO60393 SCARNA2-201ENST00000458748 420 ntBASIC17.37■□□□□ 0.37
NOBOXO60393 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.37■□□□□ 0.37
NOBOXO60393 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.37■□□□□ 0.37
NOBOXO60393 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.37■□□□□ 0.37
NOBOXO60393 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NOBOXO60393 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.37■□□□□ 0.37
NOBOXO60393 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.37■□□□□ 0.37
NOBOXO60393 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.37■□□□□ 0.37
NOBOXO60393 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.37■□□□□ 0.37
NOBOXO60393 AL049840.3-201ENST00000602669 611 ntBASIC17.37■□□□□ 0.37
NOBOXO60393 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.37■□□□□ 0.37
NOBOXO60393 MIR7706-201ENST00000613747 67 ntBASIC17.37■□□□□ 0.37
NOBOXO60393 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.37■□□□□ 0.37
NOBOXO60393 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.37■□□□□ 0.37
NOBOXO60393 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NOBOXO60393 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NOBOXO60393 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
NOBOXO60393 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.37■□□□□ 0.37
NOBOXO60393 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NOBOXO60393 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NOBOXO60393 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NOBOXO60393 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
NOBOXO60393 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
NOBOXO60393 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NOBOXO60393 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
NOBOXO60393 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
NOBOXO60393 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
NOBOXO60393 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
NOBOXO60393 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NOBOXO60393 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NOBOXO60393 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NOBOXO60393 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NOBOXO60393 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NOBOXO60393 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.36■□□□□ 0.37
NOBOXO60393 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.36■□□□□ 0.37
NOBOXO60393 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NOBOXO60393 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NOBOXO60393 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NOBOXO60393 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NOBOXO60393 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NOBOXO60393 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NOBOXO60393 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NOBOXO60393 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.36■□□□□ 0.37
NOBOXO60393 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NOBOXO60393 AC007967.3-201ENST00000434308 558 ntBASIC17.36■□□□□ 0.37
NOBOXO60393 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.36■□□□□ 0.37
NOBOXO60393 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.36■□□□□ 0.37
NOBOXO60393 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NOBOXO60393 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.36■□□□□ 0.37
NOBOXO60393 SART3-203ENST00000546611 1184 ntBASIC17.36■□□□□ 0.37
NOBOXO60393 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.36■□□□□ 0.37
NOBOXO60393 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
NOBOXO60393 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.36■□□□□ 0.37
NOBOXO60393 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.36■□□□□ 0.37
NOBOXO60393 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.36■□□□□ 0.37
NOBOXO60393 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.36■□□□□ 0.37
NOBOXO60393 FAM215A-202ENST00000632077 792 ntBASIC17.36■□□□□ 0.37
NOBOXO60393 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NOBOXO60393 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NOBOXO60393 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NOBOXO60393 AC243591.1-201ENST00000452967 1364 ntBASIC17.36■□□□□ 0.37
NOBOXO60393 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.36■□□□□ 0.37
NOBOXO60393 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NOBOXO60393 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NOBOXO60393 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
NOBOXO60393 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
NOBOXO60393 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NOBOXO60393 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NOBOXO60393 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NOBOXO60393 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NOBOXO60393 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NOBOXO60393 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NOBOXO60393 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
NOBOXO60393 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.35■□□□□ 0.37
NOBOXO60393 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.35■□□□□ 0.37
NOBOXO60393 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NOBOXO60393 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NOBOXO60393 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NOBOXO60393 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.35■□□□□ 0.37
NOBOXO60393 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
NOBOXO60393 AC009053.2-201ENST00000563701 2365 ntBASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms