Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.89■□□□□ 0.93
FOXN1O15353 VN2R19P-201ENST00000442399 1052 ntBASIC20.89■□□□□ 0.93
FOXN1O15353 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
FOXN1O15353 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.89■□□□□ 0.93
FOXN1O15353 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC20.89■□□□□ 0.93
FOXN1O15353 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
FOXN1O15353 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20.89■□□□□ 0.93
FOXN1O15353 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
FOXN1O15353 NAA60-208ENST00000570819 833 ntTSL 2 BASIC20.89■□□□□ 0.93
FOXN1O15353 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.89■□□□□ 0.93
FOXN1O15353 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC20.89■□□□□ 0.93
FOXN1O15353 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC20.89■□□□□ 0.93
FOXN1O15353 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
FOXN1O15353 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FOXN1O15353 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
FOXN1O15353 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.89■□□□□ 0.93
FOXN1O15353 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
FOXN1O15353 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
FOXN1O15353 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
FOXN1O15353 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FOXN1O15353 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXN1O15353 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.88■□□□□ 0.93
FOXN1O15353 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXN1O15353 ESPNP-201ENST00000270691 2015 ntBASIC20.88■□□□□ 0.93
FOXN1O15353 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXN1O15353 NOC2LP2-201ENST00000407594 1944 ntBASIC20.88■□□□□ 0.93
FOXN1O15353 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.88■□□□□ 0.93
FOXN1O15353 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXN1O15353 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
FOXN1O15353 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.88■□□□□ 0.93
FOXN1O15353 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXN1O15353 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
FOXN1O15353 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.88■□□□□ 0.93
FOXN1O15353 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXN1O15353 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXN1O15353 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
FOXN1O15353 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
FOXN1O15353 FAM58CP-201ENST00000435741 640 ntBASIC20.88■□□□□ 0.93
FOXN1O15353 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXN1O15353 ACTG1P14-201ENST00000446382 1122 ntBASIC20.88■□□□□ 0.93
FOXN1O15353 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
FOXN1O15353 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.88■□□□□ 0.93
FOXN1O15353 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.88■□□□□ 0.93
FOXN1O15353 MIR4751-201ENST00000578027 74 ntBASIC20.88■□□□□ 0.93
FOXN1O15353 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FOXN1O15353 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXN1O15353 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.88■□□□□ 0.93
FOXN1O15353 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXN1O15353 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
FOXN1O15353 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
FOXN1O15353 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXN1O15353 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.88■□□□□ 0.93
FOXN1O15353 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXN1O15353 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
FOXN1O15353 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FOXN1O15353 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXN1O15353 PCDHB18P-201ENST00000524813 2368 ntBASIC20.87■□□□□ 0.93
FOXN1O15353 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.87■□□□□ 0.93
FOXN1O15353 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXN1O15353 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
FOXN1O15353 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FOXN1O15353 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
FOXN1O15353 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXN1O15353 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXN1O15353 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC20.87■□□□□ 0.93
FOXN1O15353 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC20.87■□□□□ 0.93
FOXN1O15353 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FOXN1O15353 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FOXN1O15353 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
FOXN1O15353 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.87■□□□□ 0.93
FOXN1O15353 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
FOXN1O15353 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.87■□□□□ 0.93
FOXN1O15353 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXN1O15353 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXN1O15353 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
FOXN1O15353 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXN1O15353 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXN1O15353 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXN1O15353 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.87■□□□□ 0.93
FOXN1O15353 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
FOXN1O15353 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.86■□□□□ 0.93
FOXN1O15353 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXN1O15353 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXN1O15353 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.86■□□□□ 0.93
FOXN1O15353 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXN1O15353 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.86■□□□□ 0.93
FOXN1O15353 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
FOXN1O15353 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
FOXN1O15353 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
FOXN1O15353 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXN1O15353 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXN1O15353 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXN1O15353 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.86■□□□□ 0.93
FOXN1O15353 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
FOXN1O15353 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXN1O15353 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
FOXN1O15353 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
FOXN1O15353 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC20.86■□□□□ 0.93
FOXN1O15353 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
FOXN1O15353 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms