Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.38■□□□□ 0.05
CCL21O00585 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CCL21O00585 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
CCL21O00585 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CCL21O00585 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.37■□□□□ 0.05
CCL21O00585 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CCL21O00585 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CCL21O00585 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC15.37■□□□□ 0.05
CCL21O00585 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CCL21O00585 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCL21O00585 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.37■□□□□ 0.05
CCL21O00585 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
CCL21O00585 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCL21O00585 FAM86GP-201ENST00000448322 971 ntBASIC15.37■□□□□ 0.05
CCL21O00585 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CCL21O00585 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.37■□□□□ 0.05
CCL21O00585 AC112191.1-201ENST00000523689 701 ntBASIC15.37■□□□□ 0.05
CCL21O00585 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CCL21O00585 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.37■□□□□ 0.05
CCL21O00585 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CCL21O00585 AC239800.4-201ENST00000603712 296 ntBASIC15.37■□□□□ 0.05
CCL21O00585 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.37■□□□□ 0.05
CCL21O00585 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCL21O00585 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCL21O00585 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCL21O00585 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCL21O00585 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CCL21O00585 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CCL21O00585 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CCL21O00585 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCL21O00585 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.37■□□□□ 0.05
CCL21O00585 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CCL21O00585 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCL21O00585 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CCL21O00585 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCL21O00585 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCL21O00585 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCL21O00585 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCL21O00585 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCL21O00585 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.36■□□□□ 0.05
CCL21O00585 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCL21O00585 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
CCL21O00585 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCL21O00585 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCL21O00585 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCL21O00585 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.36■□□□□ 0.05
CCL21O00585 AC023141.5-201ENST00000458585 616 ntBASIC15.36■□□□□ 0.05
CCL21O00585 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCL21O00585 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CCL21O00585 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.36■□□□□ 0.05
CCL21O00585 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.36■□□□□ 0.05
CCL21O00585 AC022145.2-201ENST00000598203 171 ntBASIC15.36■□□□□ 0.05
CCL21O00585 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.36■□□□□ 0.05
CCL21O00585 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.36■□□□□ 0.05
CCL21O00585 LINC00628-201ENST00000628516 1289 ntBASIC15.36■□□□□ 0.05
CCL21O00585 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC15.36■□□□□ 0.05
CCL21O00585 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCL21O00585 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCL21O00585 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCL21O00585 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.36■□□□□ 0.05
CCL21O00585 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCL21O00585 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC15.36■□□□□ 0.05
CCL21O00585 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.36■□□□□ 0.05
CCL21O00585 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCL21O00585 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.36■□□□□ 0.05
CCL21O00585 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC15.36■□□□□ 0.05
CCL21O00585 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.35■□□□□ 0.05
CCL21O00585 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCL21O00585 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCL21O00585 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCL21O00585 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCL21O00585 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCL21O00585 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCL21O00585 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCL21O00585 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCL21O00585 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCL21O00585 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCL21O00585 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.35■□□□□ 0.05
CCL21O00585 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.35■□□□□ 0.05
CCL21O00585 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.35■□□□□ 0.05
CCL21O00585 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
CCL21O00585 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.35■□□□□ 0.05
CCL21O00585 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCL21O00585 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.35■□□□□ 0.05
CCL21O00585 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
CCL21O00585 ACTG1P4-201ENST00000425123 1122 ntBASIC15.35■□□□□ 0.05
CCL21O00585 FAM185BP-201ENST00000443595 716 ntBASIC15.35■□□□□ 0.05
CCL21O00585 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CCL21O00585 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.35■□□□□ 0.05
CCL21O00585 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.35■□□□□ 0.05
CCL21O00585 AC109322.1-201ENST00000524499 1264 ntBASIC15.35■□□□□ 0.05
CCL21O00585 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.35■□□□□ 0.05
CCL21O00585 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCL21O00585 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCL21O00585 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CCL21O00585 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.35■□□□□ 0.05
CCL21O00585 AC006116.8-202ENST00000587620 1550 ntBASIC15.35■□□□□ 0.05
CCL21O00585 AL590787.1-201ENST00000568856 1315 ntBASIC15.35■□□□□ 0.05
CCL21O00585 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCL21O00585 AL121761.2-201ENST00000598007 1648 ntBASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms