Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 TPR-209ENST00000613151 2478 ntTSL 5 BASIC13.46□□□□□ -0.25
NDUFA4O00483 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
NDUFA4O00483 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NDUFA4O00483 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NDUFA4O00483 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NDUFA4O00483 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC13.46□□□□□ -0.25
NDUFA4O00483 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NDUFA4O00483 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
NDUFA4O00483 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC13.46□□□□□ -0.25
NDUFA4O00483 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.46□□□□□ -0.25
NDUFA4O00483 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC13.46□□□□□ -0.25
NDUFA4O00483 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC13.46□□□□□ -0.25
NDUFA4O00483 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NDUFA4O00483 BNIP3P18-201ENST00000593976 575 ntBASIC13.46□□□□□ -0.25
NDUFA4O00483 AC114341.1-201ENST00000618070 349 ntBASIC13.46□□□□□ -0.25
NDUFA4O00483 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NDUFA4O00483 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NDUFA4O00483 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC13.46□□□□□ -0.25
NDUFA4O00483 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NDUFA4O00483 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC13.46□□□□□ -0.25
NDUFA4O00483 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NDUFA4O00483 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC13.46□□□□□ -0.26
NDUFA4O00483 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
NDUFA4O00483 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC13.46□□□□□ -0.26
NDUFA4O00483 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NDUFA4O00483 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
NDUFA4O00483 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
NDUFA4O00483 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFA4O00483 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFA4O00483 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
NDUFA4O00483 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFA4O00483 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFA4O00483 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
NDUFA4O00483 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC13.45□□□□□ -0.26
NDUFA4O00483 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC13.45□□□□□ -0.26
NDUFA4O00483 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC13.45□□□□□ -0.26
NDUFA4O00483 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
NDUFA4O00483 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC13.45□□□□□ -0.26
NDUFA4O00483 INTS4P1-201ENST00000438455 1935 ntBASIC13.45□□□□□ -0.26
NDUFA4O00483 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFA4O00483 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFA4O00483 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFA4O00483 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFA4O00483 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFA4O00483 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
NDUFA4O00483 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC13.45□□□□□ -0.26
NDUFA4O00483 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFA4O00483 AL353593.2-201ENST00000602529 1483 ntBASIC13.45□□□□□ -0.26
NDUFA4O00483 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFA4O00483 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.45□□□□□ -0.26
NDUFA4O00483 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFA4O00483 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFA4O00483 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC13.45□□□□□ -0.26
NDUFA4O00483 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
NDUFA4O00483 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13.45□□□□□ -0.26
NDUFA4O00483 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFA4O00483 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC13.45□□□□□ -0.26
NDUFA4O00483 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
NDUFA4O00483 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
NDUFA4O00483 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFA4O00483 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFA4O00483 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFA4O00483 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFA4O00483 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFA4O00483 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFA4O00483 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
NDUFA4O00483 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFA4O00483 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFA4O00483 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFA4O00483 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFA4O00483 CEP83-AS1-201ENST00000623122 2482 ntBASIC13.45□□□□□ -0.26
NDUFA4O00483 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFA4O00483 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
NDUFA4O00483 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFA4O00483 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NDUFA4O00483 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NDUFA4O00483 AC141586.5-201ENST00000624546 2050 ntBASIC13.44□□□□□ -0.26
NDUFA4O00483 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NDUFA4O00483 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
NDUFA4O00483 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NDUFA4O00483 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NDUFA4O00483 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
NDUFA4O00483 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.44□□□□□ -0.26
NDUFA4O00483 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NDUFA4O00483 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NDUFA4O00483 AC003669.1-201ENST00000334569 611 ntBASIC13.44□□□□□ -0.26
NDUFA4O00483 ENSA-206ENST00000361631 725 ntTSL 2 BASIC13.44□□□□□ -0.26
NDUFA4O00483 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.44□□□□□ -0.26
NDUFA4O00483 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NDUFA4O00483 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13.44□□□□□ -0.26
NDUFA4O00483 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NDUFA4O00483 SRP19-202ENST00000445150 833 ntTSL 2 BASIC13.44□□□□□ -0.26
NDUFA4O00483 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NDUFA4O00483 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NDUFA4O00483 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NDUFA4O00483 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
NDUFA4O00483 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
NDUFA4O00483 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13.44□□□□□ -0.26
NDUFA4O00483 STK25P1-201ENST00000585406 838 ntBASIC13.44□□□□□ -0.26
NDUFA4O00483 TK1-204ENST00000590430 683 ntTSL 3 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms