Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.69■□□□□ 0.58
O00370 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
O00370 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
O00370 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
O00370 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.69■□□□□ 0.58
O00370 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
O00370 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
O00370 TSPY19P-201ENST00000418461 509 ntBASIC18.69■□□□□ 0.58
O00370 TSPY18P-201ENST00000441642 509 ntBASIC18.69■□□□□ 0.58
O00370 KRT16P4-201ENST00000453883 522 ntBASIC18.69■□□□□ 0.58
O00370 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.69■□□□□ 0.58
O00370 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
O00370 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.69■□□□□ 0.58
O00370 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.69■□□□□ 0.58
O00370 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.69■□□□□ 0.58
O00370 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
O00370 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.69■□□□□ 0.58
O00370 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
O00370 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
O00370 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
O00370 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
O00370 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.69■□□□□ 0.58
O00370 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
O00370 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
O00370 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
O00370 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
O00370 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
O00370 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
O00370 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.69■□□□□ 0.58
O00370 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
O00370 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
O00370 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.68■□□□□ 0.58
O00370 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.68■□□□□ 0.58
O00370 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.68■□□□□ 0.58
O00370 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
O00370 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.68■□□□□ 0.58
O00370 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
O00370 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
O00370 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
O00370 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
O00370 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
O00370 AC103564.2-201ENST00000432853 1299 ntBASIC18.68■□□□□ 0.58
O00370 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.68■□□□□ 0.58
O00370 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
O00370 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.68■□□□□ 0.58
O00370 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.68■□□□□ 0.58
O00370 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.68■□□□□ 0.58
O00370 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.68■□□□□ 0.58
O00370 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.68■□□□□ 0.58
O00370 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.68■□□□□ 0.58
O00370 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
O00370 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
O00370 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
O00370 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.68■□□□□ 0.58
O00370 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
O00370 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
O00370 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
O00370 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
O00370 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
O00370 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
O00370 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.68■□□□□ 0.58
O00370 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
O00370 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
O00370 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
O00370 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
O00370 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
O00370 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
O00370 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
O00370 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
O00370 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
O00370 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
O00370 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
O00370 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.67■□□□□ 0.58
O00370 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
O00370 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
O00370 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
O00370 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
O00370 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
O00370 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
O00370 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
O00370 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.67■□□□□ 0.58
O00370 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
O00370 KRT18P31-201ENST00000506277 1292 ntBASIC18.67■□□□□ 0.58
O00370 AC109462.3-201ENST00000573934 613 ntBASIC18.67■□□□□ 0.58
O00370 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.67■□□□□ 0.58
O00370 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.67■□□□□ 0.58
O00370 AL591684.3-201ENST00000605187 298 ntBASIC18.67■□□□□ 0.58
O00370 AL121772.3-201ENST00000610840 674 ntBASIC18.67■□□□□ 0.58
O00370 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.67■□□□□ 0.58
O00370 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
O00370 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.67■□□□□ 0.58
O00370 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
O00370 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
O00370 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
O00370 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.67■□□□□ 0.58
O00370 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
O00370 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.67■□□□□ 0.58
O00370 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.67■□□□□ 0.58
O00370 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
O00370 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms