Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.72■□□□□ 0.43
AP3B1O00203 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP3B1O00203 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP3B1O00203 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP3B1O00203 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
AP3B1O00203 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP3B1O00203 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP3B1O00203 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.72■□□□□ 0.43
AP3B1O00203 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP3B1O00203 BX276092.5-203ENST00000456199 560 ntBASIC17.72■□□□□ 0.43
AP3B1O00203 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP3B1O00203 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.72■□□□□ 0.43
AP3B1O00203 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
AP3B1O00203 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP3B1O00203 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP3B1O00203 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP3B1O00203 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP3B1O00203 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP3B1O00203 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP3B1O00203 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP3B1O00203 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP3B1O00203 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP3B1O00203 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.72■□□□□ 0.43
AP3B1O00203 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP3B1O00203 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.72■□□□□ 0.43
AP3B1O00203 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP3B1O00203 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP3B1O00203 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
AP3B1O00203 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.71■□□□□ 0.43
AP3B1O00203 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
AP3B1O00203 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP3B1O00203 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP3B1O00203 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.71■□□□□ 0.43
AP3B1O00203 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP3B1O00203 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP3B1O00203 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP3B1O00203 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.71■□□□□ 0.43
AP3B1O00203 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.71■□□□□ 0.43
AP3B1O00203 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP3B1O00203 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP3B1O00203 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.71■□□□□ 0.43
AP3B1O00203 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.71■□□□□ 0.43
AP3B1O00203 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.71■□□□□ 0.43
AP3B1O00203 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
AP3B1O00203 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.71■□□□□ 0.43
AP3B1O00203 AC019129.2-201ENST00000609837 1235 ntBASIC17.71■□□□□ 0.43
AP3B1O00203 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.71■□□□□ 0.43
AP3B1O00203 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.71■□□□□ 0.43
AP3B1O00203 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
AP3B1O00203 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
AP3B1O00203 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP3B1O00203 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.71■□□□□ 0.43
AP3B1O00203 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
AP3B1O00203 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
AP3B1O00203 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP3B1O00203 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP3B1O00203 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP3B1O00203 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP3B1O00203 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
AP3B1O00203 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.71■□□□□ 0.42
AP3B1O00203 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
AP3B1O00203 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AP3B1O00203 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
AP3B1O00203 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.7■□□□□ 0.42
AP3B1O00203 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP3B1O00203 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP3B1O00203 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
AP3B1O00203 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
AP3B1O00203 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.7■□□□□ 0.42
AP3B1O00203 AC012313.1-201ENST00000593393 3059 ntBASIC17.7■□□□□ 0.42
AP3B1O00203 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP3B1O00203 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
AP3B1O00203 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP3B1O00203 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP3B1O00203 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.7■□□□□ 0.42
AP3B1O00203 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.7■□□□□ 0.42
AP3B1O00203 CHCHD2P8-201ENST00000429873 447 ntBASIC17.7■□□□□ 0.42
AP3B1O00203 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.7■□□□□ 0.42
AP3B1O00203 AC109462.3-201ENST00000573934 613 ntBASIC17.7■□□□□ 0.42
AP3B1O00203 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AP3B1O00203 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.7■□□□□ 0.42
AP3B1O00203 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.7■□□□□ 0.42
AP3B1O00203 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.7■□□□□ 0.42
AP3B1O00203 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
AP3B1O00203 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AP3B1O00203 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.7■□□□□ 0.42
AP3B1O00203 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AP3B1O00203 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
AP3B1O00203 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP3B1O00203 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP3B1O00203 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
AP3B1O00203 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AP3B1O00203 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.7■□□□□ 0.42
AP3B1O00203 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP3B1O00203 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AP3B1O00203 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AP3B1O00203 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.7■□□□□ 0.42
AP3B1O00203 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP3B1O00203 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP3B1O00203 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms