Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM6-TRIM34B2RNG4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.48■■□□□ 1.03
TRIM6-TRIM34B2RNG4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
TRIM6-TRIM34B2RNG4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM6-TRIM34B2RNG4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM6-TRIM34B2RNG4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM6-TRIM34B2RNG4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM6-TRIM34B2RNG4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
TRIM6-TRIM34B2RNG4 LYSMD4-203ENST00000378904 2122 ntBASIC21.47■■□□□ 1.03
TRIM6-TRIM34B2RNG4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM6-TRIM34B2RNG4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM6-TRIM34B2RNG4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM6-TRIM34B2RNG4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM6-TRIM34B2RNG4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC21.47■■□□□ 1.03
TRIM6-TRIM34B2RNG4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
TRIM6-TRIM34B2RNG4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
TRIM6-TRIM34B2RNG4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM6-TRIM34B2RNG4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21.47■■□□□ 1.03
TRIM6-TRIM34B2RNG4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC21.47■■□□□ 1.03
TRIM6-TRIM34B2RNG4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.47■■□□□ 1.03
TRIM6-TRIM34B2RNG4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
TRIM6-TRIM34B2RNG4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
TRIM6-TRIM34B2RNG4 AC092119.3-201ENST00000612618 583 ntBASIC21.47■■□□□ 1.03
TRIM6-TRIM34B2RNG4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC21.47■■□□□ 1.03
TRIM6-TRIM34B2RNG4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.47■■□□□ 1.03
TRIM6-TRIM34B2RNG4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM6-TRIM34B2RNG4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
TRIM6-TRIM34B2RNG4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM6-TRIM34B2RNG4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC21.47■■□□□ 1.03
TRIM6-TRIM34B2RNG4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM6-TRIM34B2RNG4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC21.47■■□□□ 1.03
TRIM6-TRIM34B2RNG4 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
TRIM6-TRIM34B2RNG4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM6-TRIM34B2RNG4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC21.47■■□□□ 1.03
TRIM6-TRIM34B2RNG4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM6-TRIM34B2RNG4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM6-TRIM34B2RNG4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM6-TRIM34B2RNG4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM6-TRIM34B2RNG4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC21.46■■□□□ 1.03
TRIM6-TRIM34B2RNG4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM6-TRIM34B2RNG4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM6-TRIM34B2RNG4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM6-TRIM34B2RNG4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM6-TRIM34B2RNG4 MINOS1P3-201ENST00000457048 203 ntBASIC21.46■■□□□ 1.03
TRIM6-TRIM34B2RNG4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC21.46■■□□□ 1.03
TRIM6-TRIM34B2RNG4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC21.46■■□□□ 1.03
TRIM6-TRIM34B2RNG4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM6-TRIM34B2RNG4 MIR3180-1-201ENST00000580374 94 ntBASIC21.46■■□□□ 1.03
TRIM6-TRIM34B2RNG4 MIR3180-3-201ENST00000584616 94 ntBASIC21.46■■□□□ 1.03
TRIM6-TRIM34B2RNG4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.46■■□□□ 1.03
TRIM6-TRIM34B2RNG4 NPAP1P7-201ENST00000613027 823 ntBASIC21.46■■□□□ 1.03
TRIM6-TRIM34B2RNG4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
TRIM6-TRIM34B2RNG4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM6-TRIM34B2RNG4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM6-TRIM34B2RNG4 AL023806.1-201ENST00000603994 1649 ntBASIC21.46■■□□□ 1.03
TRIM6-TRIM34B2RNG4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM6-TRIM34B2RNG4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM6-TRIM34B2RNG4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM6-TRIM34B2RNG4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM6-TRIM34B2RNG4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM6-TRIM34B2RNG4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC21.46■■□□□ 1.03
TRIM6-TRIM34B2RNG4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
TRIM6-TRIM34B2RNG4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC21.45■■□□□ 1.02
TRIM6-TRIM34B2RNG4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC21.45■■□□□ 1.02
TRIM6-TRIM34B2RNG4 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC21.45■■□□□ 1.02
TRIM6-TRIM34B2RNG4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM6-TRIM34B2RNG4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC21.45■■□□□ 1.02
TRIM6-TRIM34B2RNG4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM6-TRIM34B2RNG4 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM6-TRIM34B2RNG4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM6-TRIM34B2RNG4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
TRIM6-TRIM34B2RNG4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
TRIM6-TRIM34B2RNG4 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM6-TRIM34B2RNG4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM6-TRIM34B2RNG4 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.45■■□□□ 1.02
TRIM6-TRIM34B2RNG4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
TRIM6-TRIM34B2RNG4 KRT17P6-201ENST00000453795 1220 ntBASIC21.45■■□□□ 1.02
TRIM6-TRIM34B2RNG4 AP000867.3-201ENST00000524675 377 ntBASIC21.45■■□□□ 1.02
TRIM6-TRIM34B2RNG4 AC109462.3-201ENST00000573934 613 ntBASIC21.45■■□□□ 1.02
TRIM6-TRIM34B2RNG4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC21.45■■□□□ 1.02
TRIM6-TRIM34B2RNG4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM6-TRIM34B2RNG4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM6-TRIM34B2RNG4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM6-TRIM34B2RNG4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM6-TRIM34B2RNG4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM6-TRIM34B2RNG4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM6-TRIM34B2RNG4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM6-TRIM34B2RNG4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM6-TRIM34B2RNG4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM6-TRIM34B2RNG4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
TRIM6-TRIM34B2RNG4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM6-TRIM34B2RNG4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM6-TRIM34B2RNG4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM6-TRIM34B2RNG4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM6-TRIM34B2RNG4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM6-TRIM34B2RNG4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM6-TRIM34B2RNG4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
TRIM6-TRIM34B2RNG4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM6-TRIM34B2RNG4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM6-TRIM34B2RNG4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms