Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SRRM4A7MD48 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.13□□□□□ -0.15
SRRM4A7MD48 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SRRM4A7MD48 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SRRM4A7MD48 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.12□□□□□ -0.15
SRRM4A7MD48 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SRRM4A7MD48 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SRRM4A7MD48 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SRRM4A7MD48 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SRRM4A7MD48 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.12□□□□□ -0.15
SRRM4A7MD48 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SRRM4A7MD48 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SRRM4A7MD48 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
SRRM4A7MD48 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.12□□□□□ -0.15
SRRM4A7MD48 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SRRM4A7MD48 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SRRM4A7MD48 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SRRM4A7MD48 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SRRM4A7MD48 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
SRRM4A7MD48 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SRRM4A7MD48 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.12□□□□□ -0.15
SRRM4A7MD48 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SRRM4A7MD48 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.12□□□□□ -0.15
SRRM4A7MD48 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SRRM4A7MD48 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SRRM4A7MD48 AC002558.1-201ENST00000488906 803 ntBASIC14.12□□□□□ -0.15
SRRM4A7MD48 FAM86EP-206ENST00000510506 987 ntBASIC14.12□□□□□ -0.15
SRRM4A7MD48 AL049597.2-201ENST00000565575 961 ntBASIC14.12□□□□□ -0.15
SRRM4A7MD48 AC005336.2-201ENST00000593183 939 ntBASIC14.12□□□□□ -0.15
SRRM4A7MD48 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.12□□□□□ -0.15
SRRM4A7MD48 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
SRRM4A7MD48 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SRRM4A7MD48 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SRRM4A7MD48 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SRRM4A7MD48 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.12□□□□□ -0.15
SRRM4A7MD48 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SRRM4A7MD48 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
SRRM4A7MD48 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SRRM4A7MD48 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SRRM4A7MD48 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SRRM4A7MD48 AC005332.1-201ENST00000577698 1310 ntBASIC14.12□□□□□ -0.15
SRRM4A7MD48 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SRRM4A7MD48 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
SRRM4A7MD48 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SRRM4A7MD48 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SRRM4A7MD48 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SRRM4A7MD48 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SRRM4A7MD48 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SRRM4A7MD48 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SRRM4A7MD48 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.11□□□□□ -0.15
SRRM4A7MD48 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SRRM4A7MD48 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SRRM4A7MD48 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SRRM4A7MD48 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SRRM4A7MD48 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SRRM4A7MD48 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SRRM4A7MD48 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SRRM4A7MD48 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SRRM4A7MD48 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.11□□□□□ -0.15
SRRM4A7MD48 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SRRM4A7MD48 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SRRM4A7MD48 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SRRM4A7MD48 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SRRM4A7MD48 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.11□□□□□ -0.15
SRRM4A7MD48 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.11□□□□□ -0.15
SRRM4A7MD48 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.11□□□□□ -0.15
SRRM4A7MD48 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.11□□□□□ -0.15
SRRM4A7MD48 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SRRM4A7MD48 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.11□□□□□ -0.15
SRRM4A7MD48 AC011840.4-201ENST00000578471 627 ntBASIC14.11□□□□□ -0.15
SRRM4A7MD48 AL138831.2-201ENST00000606564 490 ntBASIC14.11□□□□□ -0.15
SRRM4A7MD48 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.11□□□□□ -0.15
SRRM4A7MD48 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.11□□□□□ -0.15
SRRM4A7MD48 AL121956.5-201ENST00000625261 221 ntBASIC14.11□□□□□ -0.15
SRRM4A7MD48 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.11□□□□□ -0.15
SRRM4A7MD48 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SRRM4A7MD48 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.11□□□□□ -0.15
SRRM4A7MD48 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.11□□□□□ -0.15
SRRM4A7MD48 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SRRM4A7MD48 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SRRM4A7MD48 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SRRM4A7MD48 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.11□□□□□ -0.15
SRRM4A7MD48 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SRRM4A7MD48 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SRRM4A7MD48 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.11□□□□□ -0.15
SRRM4A7MD48 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SRRM4A7MD48 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SRRM4A7MD48 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SRRM4A7MD48 AC099398.1-201ENST00000567919 2776 ntBASIC14.11□□□□□ -0.15
SRRM4A7MD48 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.11□□□□□ -0.15
SRRM4A7MD48 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
SRRM4A7MD48 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRRM4A7MD48 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.1□□□□□ -0.15
SRRM4A7MD48 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SRRM4A7MD48 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SRRM4A7MD48 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRRM4A7MD48 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRRM4A7MD48 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SRRM4A7MD48 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SRRM4A7MD48 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms