Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SSC5DA1L4H1 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.22■□□□□ 0.83
SSC5DA1L4H1 TUBB3P1-201ENST00000405796 1332 ntBASIC20.22■□□□□ 0.83
SSC5DA1L4H1 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SSC5DA1L4H1 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SSC5DA1L4H1 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SSC5DA1L4H1 RPL30-202ENST00000396070 440 ntTSL 2 BASIC20.22■□□□□ 0.83
SSC5DA1L4H1 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC20.22■□□□□ 0.83
SSC5DA1L4H1 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSC5DA1L4H1 RAB34-224ENST00000636513 888 ntTSL 5 BASIC20.22■□□□□ 0.83
SSC5DA1L4H1 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SSC5DA1L4H1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSC5DA1L4H1 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.22■□□□□ 0.83
SSC5DA1L4H1 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSC5DA1L4H1 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSC5DA1L4H1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SSC5DA1L4H1 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
SSC5DA1L4H1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.22■□□□□ 0.83
SSC5DA1L4H1 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.21■□□□□ 0.83
SSC5DA1L4H1 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SSC5DA1L4H1 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC20.21■□□□□ 0.83
SSC5DA1L4H1 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SSC5DA1L4H1 METTL26-204ENST00000397665 558 ntTSL 2 BASIC20.21■□□□□ 0.83
SSC5DA1L4H1 MIR943-201ENST00000401286 94 ntBASIC20.21■□□□□ 0.83
SSC5DA1L4H1 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC20.21■□□□□ 0.83
SSC5DA1L4H1 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC20.21■□□□□ 0.83
SSC5DA1L4H1 AC125807.1-201ENST00000483097 614 ntBASIC20.21■□□□□ 0.83
SSC5DA1L4H1 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC20.21■□□□□ 0.83
SSC5DA1L4H1 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC20.21■□□□□ 0.83
SSC5DA1L4H1 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC20.21■□□□□ 0.83
SSC5DA1L4H1 DUX4L17-201ENST00000557360 1267 ntBASIC20.21■□□□□ 0.83
SSC5DA1L4H1 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SSC5DA1L4H1 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SSC5DA1L4H1 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SSC5DA1L4H1 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.21■□□□□ 0.83
SSC5DA1L4H1 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SSC5DA1L4H1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.21■□□□□ 0.83
SSC5DA1L4H1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SSC5DA1L4H1 KRT18P55-202ENST00000578578 1546 ntBASIC20.21■□□□□ 0.83
SSC5DA1L4H1 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SSC5DA1L4H1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SSC5DA1L4H1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SSC5DA1L4H1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.21■□□□□ 0.83
SSC5DA1L4H1 FO538757.1-201ENST00000623083 1397 ntBASIC20.21■□□□□ 0.83
SSC5DA1L4H1 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.21■□□□□ 0.83
SSC5DA1L4H1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SSC5DA1L4H1 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.21■□□□□ 0.83
SSC5DA1L4H1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SSC5DA1L4H1 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SSC5DA1L4H1 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SSC5DA1L4H1 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SSC5DA1L4H1 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SSC5DA1L4H1 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC20.21■□□□□ 0.83
SSC5DA1L4H1 TREML5P-201ENST00000421694 576 ntBASIC20.21■□□□□ 0.83
SSC5DA1L4H1 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SSC5DA1L4H1 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC20.21■□□□□ 0.83
SSC5DA1L4H1 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC20.21■□□□□ 0.83
SSC5DA1L4H1 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC20.21■□□□□ 0.83
SSC5DA1L4H1 AC005225.4-201ENST00000557330 545 ntBASIC20.21■□□□□ 0.83
SSC5DA1L4H1 CD7-202ENST00000578509 925 ntTSL 3 BASIC20.21■□□□□ 0.83
SSC5DA1L4H1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SSC5DA1L4H1 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SSC5DA1L4H1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SSC5DA1L4H1 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SSC5DA1L4H1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SSC5DA1L4H1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.2■□□□□ 0.82
SSC5DA1L4H1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SSC5DA1L4H1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SSC5DA1L4H1 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SSC5DA1L4H1 AC107890.1-201ENST00000422478 521 ntBASIC20.2■□□□□ 0.82
SSC5DA1L4H1 INGX-202ENST00000489074 768 ntBASIC20.2■□□□□ 0.82
SSC5DA1L4H1 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC20.2■□□□□ 0.82
SSC5DA1L4H1 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
SSC5DA1L4H1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SSC5DA1L4H1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SSC5DA1L4H1 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SSC5DA1L4H1 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
SSC5DA1L4H1 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SSC5DA1L4H1 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SSC5DA1L4H1 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.2■□□□□ 0.82
SSC5DA1L4H1 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SSC5DA1L4H1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.2■□□□□ 0.82
SSC5DA1L4H1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SSC5DA1L4H1 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SSC5DA1L4H1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.19■□□□□ 0.82
SSC5DA1L4H1 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SSC5DA1L4H1 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.19■□□□□ 0.82
SSC5DA1L4H1 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.19■□□□□ 0.82
SSC5DA1L4H1 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SSC5DA1L4H1 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SSC5DA1L4H1 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SSC5DA1L4H1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SSC5DA1L4H1 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SSC5DA1L4H1 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SSC5DA1L4H1 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SSC5DA1L4H1 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC20.19■□□□□ 0.82
SSC5DA1L4H1 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SSC5DA1L4H1 TERF1P3-201ENST00000505638 1227 ntBASIC20.19■□□□□ 0.82
SSC5DA1L4H1 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC20.19■□□□□ 0.82
SSC5DA1L4H1 AL390754.1-201ENST00000619088 582 ntBASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms