Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV9S1A1TA0A576 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.66■□□□□ 0.42
TCRBV9S1A1TA0A576 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.66■□□□□ 0.42
TCRBV9S1A1TA0A576 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV9S1A1TA0A576 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV9S1A1TA0A576 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV9S1A1TA0A576 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV9S1A1TA0A576 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV9S1A1TA0A576 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.66■□□□□ 0.42
TCRBV9S1A1TA0A576 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TCRBV9S1A1TA0A576 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV9S1A1TA0A576 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV9S1A1TA0A576 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV9S1A1TA0A576 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV9S1A1TA0A576 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV9S1A1TA0A576 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV9S1A1TA0A576 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TCRBV9S1A1TA0A576 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TCRBV9S1A1TA0A576 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.65■□□□□ 0.42
TCRBV9S1A1TA0A576 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.65■□□□□ 0.42
TCRBV9S1A1TA0A576 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV9S1A1TA0A576 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV9S1A1TA0A576 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV9S1A1TA0A576 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV9S1A1TA0A576 AC092053.1-201ENST00000605787 1936 ntBASIC17.65■□□□□ 0.42
TCRBV9S1A1TA0A576 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV9S1A1TA0A576 AC093525.9-201ENST00000624961 1746 ntBASIC17.65■□□□□ 0.42
TCRBV9S1A1TA0A576 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.65■□□□□ 0.42
TCRBV9S1A1TA0A576 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV9S1A1TA0A576 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.65■□□□□ 0.42
TCRBV9S1A1TA0A576 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV9S1A1TA0A576 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV9S1A1TA0A576 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.65■□□□□ 0.42
TCRBV9S1A1TA0A576 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.65■□□□□ 0.42
TCRBV9S1A1TA0A576 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TCRBV9S1A1TA0A576 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV9S1A1TA0A576 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV9S1A1TA0A576 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV9S1A1TA0A576 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV9S1A1TA0A576 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV9S1A1TA0A576 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV9S1A1TA0A576 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
TCRBV9S1A1TA0A576 PCDHB19P-201ENST00000570871 2371 ntBASIC17.65■□□□□ 0.42
TCRBV9S1A1TA0A576 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV9S1A1TA0A576 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.64■□□□□ 0.42
TCRBV9S1A1TA0A576 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.42
TCRBV9S1A1TA0A576 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
TCRBV9S1A1TA0A576 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
TCRBV9S1A1TA0A576 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TCRBV9S1A1TA0A576 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
TCRBV9S1A1TA0A576 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV9S1A1TA0A576 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV9S1A1TA0A576 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV9S1A1TA0A576 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV9S1A1TA0A576 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.64■□□□□ 0.41
TCRBV9S1A1TA0A576 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV9S1A1TA0A576 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV9S1A1TA0A576 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV9S1A1TA0A576 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.64■□□□□ 0.41
TCRBV9S1A1TA0A576 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.64■□□□□ 0.41
TCRBV9S1A1TA0A576 COX5BP2-201ENST00000392354 334 ntBASIC17.64■□□□□ 0.41
TCRBV9S1A1TA0A576 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.64■□□□□ 0.41
TCRBV9S1A1TA0A576 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.64■□□□□ 0.41
TCRBV9S1A1TA0A576 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.64■□□□□ 0.41
TCRBV9S1A1TA0A576 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV9S1A1TA0A576 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TCRBV9S1A1TA0A576 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV9S1A1TA0A576 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV9S1A1TA0A576 AC097374.2-201ENST00000618617 1306 ntBASIC17.64■□□□□ 0.41
TCRBV9S1A1TA0A576 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV9S1A1TA0A576 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.64■□□□□ 0.41
TCRBV9S1A1TA0A576 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV9S1A1TA0A576 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV9S1A1TA0A576 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV9S1A1TA0A576 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TCRBV9S1A1TA0A576 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.63■□□□□ 0.41
TCRBV9S1A1TA0A576 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV9S1A1TA0A576 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV9S1A1TA0A576 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV9S1A1TA0A576 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV9S1A1TA0A576 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV9S1A1TA0A576 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV9S1A1TA0A576 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV9S1A1TA0A576 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV9S1A1TA0A576 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV9S1A1TA0A576 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV9S1A1TA0A576 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV9S1A1TA0A576 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.63■□□□□ 0.41
TCRBV9S1A1TA0A576 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV9S1A1TA0A576 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV9S1A1TA0A576 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.63■□□□□ 0.41
TCRBV9S1A1TA0A576 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV9S1A1TA0A576 HBZP1-201ENST00000354915 429 ntBASIC17.63■□□□□ 0.41
TCRBV9S1A1TA0A576 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV9S1A1TA0A576 BX664615.1-201ENST00000443558 458 ntBASIC17.63■□□□□ 0.41
TCRBV9S1A1TA0A576 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV9S1A1TA0A576 AC093827.2-201ENST00000512654 315 ntBASIC17.63■□□□□ 0.41
TCRBV9S1A1TA0A576 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV9S1A1TA0A576 AC005332.3-201ENST00000589904 676 ntBASIC17.63■□□□□ 0.41
TCRBV9S1A1TA0A576 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms