Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 KRT8P9-201ENST00000558927 1449 ntBASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 AC092171.3-201ENST00000610122 2651 ntBASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 ESRRAP1-201ENST00000400596 1257 ntBASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 AC007950.2-201ENST00000615045 2347 ntBASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRDV1A0A1B0GX56 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 CD177P1-201ENST00000606252 935 ntBASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 AC073648.6-201ENST00000641589 218 ntBASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRDV1A0A1B0GX56 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms