Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 MED22-202ENST00000371999 987 ntTSL 3 BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 PENK-208ENST00000523051 772 ntTSL 5 BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 SART3-203ENST00000546611 1184 ntBASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 AL773604.1-201ENST00000617417 272 ntBASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 AL139288.1-201ENST00000623748 933 ntBASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 AC073592.5-201ENST00000624854 528 ntBASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
IGHV4-28A0A0C4DH34 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 HLA-DQB1-201ENST00000374943 1656 ntBASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 TLE1-202ENST00000376484 666 ntTSL 3 BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 RNPS1P1-201ENST00000507437 918 ntBASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 AC109462.3-201ENST00000573934 613 ntBASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 AD001527.2-201ENST00000622994 785 ntBASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 PMPCAP1-201ENST00000508114 1576 ntBASIC12.67□□□□□ -0.38
IGHV4-28A0A0C4DH34 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms