Protein–RNA interactions for Protein: Q9Y6R1

SLC4A4, Electrogenic sodium bicarbonate cotransporter 1, humanhuman

Predictions only

Length 1,079 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A4Q9Y6R1 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.89■□□□□ 0.93
SLC4A4Q9Y6R1 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.89■□□□□ 0.93
SLC4A4Q9Y6R1 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.89■□□□□ 0.93
SLC4A4Q9Y6R1 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.89■□□□□ 0.93
SLC4A4Q9Y6R1 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.89■□□□□ 0.93
SLC4A4Q9Y6R1 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.89■□□□□ 0.93
SLC4A4Q9Y6R1 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.89■□□□□ 0.93
SLC4A4Q9Y6R1 AC012640.2-201ENST00000561606 901 ntBASIC20.89■□□□□ 0.93
SLC4A4Q9Y6R1 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.89■□□□□ 0.93
SLC4A4Q9Y6R1 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.89■□□□□ 0.93
SLC4A4Q9Y6R1 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
SLC4A4Q9Y6R1 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC4A4Q9Y6R1 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
SLC4A4Q9Y6R1 HLA-J-201ENST00000462773 1622 ntBASIC20.89■□□□□ 0.93
SLC4A4Q9Y6R1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC4A4Q9Y6R1 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.89■□□□□ 0.93
SLC4A4Q9Y6R1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SLC4A4Q9Y6R1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC4A4Q9Y6R1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC4A4Q9Y6R1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC4A4Q9Y6R1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.88■□□□□ 0.93
SLC4A4Q9Y6R1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SLC4A4Q9Y6R1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLC4A4Q9Y6R1 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC4A4Q9Y6R1 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
SLC4A4Q9Y6R1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC4A4Q9Y6R1 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC4A4Q9Y6R1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC4A4Q9Y6R1 AC243591.1-201ENST00000452967 1364 ntBASIC20.88■□□□□ 0.93
SLC4A4Q9Y6R1 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLC4A4Q9Y6R1 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC4A4Q9Y6R1 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
SLC4A4Q9Y6R1 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC4A4Q9Y6R1 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC4A4Q9Y6R1 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC4A4Q9Y6R1 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC4A4Q9Y6R1 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.88■□□□□ 0.93
SLC4A4Q9Y6R1 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.88■□□□□ 0.93
SLC4A4Q9Y6R1 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC4A4Q9Y6R1 AC093909.1-201ENST00000504731 1122 ntBASIC20.88■□□□□ 0.93
SLC4A4Q9Y6R1 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.88■□□□□ 0.93
SLC4A4Q9Y6R1 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.88■□□□□ 0.93
SLC4A4Q9Y6R1 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.88■□□□□ 0.93
SLC4A4Q9Y6R1 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.88■□□□□ 0.93
SLC4A4Q9Y6R1 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC4A4Q9Y6R1 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.88■□□□□ 0.93
SLC4A4Q9Y6R1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLC4A4Q9Y6R1 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC4A4Q9Y6R1 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.88■□□□□ 0.93
SLC4A4Q9Y6R1 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC4A4Q9Y6R1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLC4A4Q9Y6R1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SLC4A4Q9Y6R1 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC4A4Q9Y6R1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC4A4Q9Y6R1 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC4A4Q9Y6R1 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC4A4Q9Y6R1 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC4A4Q9Y6R1 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC4A4Q9Y6R1 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC4A4Q9Y6R1 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SLC4A4Q9Y6R1 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC4A4Q9Y6R1 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC4A4Q9Y6R1 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.87■□□□□ 0.93
SLC4A4Q9Y6R1 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.87■□□□□ 0.93
SLC4A4Q9Y6R1 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.87■□□□□ 0.93
SLC4A4Q9Y6R1 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC4A4Q9Y6R1 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.87■□□□□ 0.93
SLC4A4Q9Y6R1 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC4A4Q9Y6R1 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.87■□□□□ 0.93
SLC4A4Q9Y6R1 AC116407.3-201ENST00000623905 1129 ntBASIC20.87■□□□□ 0.93
SLC4A4Q9Y6R1 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC4A4Q9Y6R1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SLC4A4Q9Y6R1 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
SLC4A4Q9Y6R1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC4A4Q9Y6R1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.87■□□□□ 0.93
SLC4A4Q9Y6R1 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC4A4Q9Y6R1 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC4A4Q9Y6R1 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC4A4Q9Y6R1 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC4A4Q9Y6R1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC4A4Q9Y6R1 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC4A4Q9Y6R1 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC4A4Q9Y6R1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC4A4Q9Y6R1 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
SLC4A4Q9Y6R1 AL133373.2-201ENST00000623187 2828 ntBASIC20.86■□□□□ 0.93
SLC4A4Q9Y6R1 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC4A4Q9Y6R1 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.86■□□□□ 0.93
SLC4A4Q9Y6R1 NOC2LP2-201ENST00000407594 1944 ntBASIC20.86■□□□□ 0.93
SLC4A4Q9Y6R1 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC4A4Q9Y6R1 IL9RP2-201ENST00000423948 1312 ntBASIC20.86■□□□□ 0.93
SLC4A4Q9Y6R1 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC4A4Q9Y6R1 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC4A4Q9Y6R1 AL590627.1-203ENST00000421194 1026 ntBASIC20.86■□□□□ 0.93
SLC4A4Q9Y6R1 LAGE3P1-201ENST00000425356 484 ntBASIC20.86■□□□□ 0.93
SLC4A4Q9Y6R1 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.86■□□□□ 0.93
SLC4A4Q9Y6R1 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.86■□□□□ 0.93
SLC4A4Q9Y6R1 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.86■□□□□ 0.93
SLC4A4Q9Y6R1 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.86■□□□□ 0.93
SLC4A4Q9Y6R1 AC139887.3-201ENST00000568585 713 ntBASIC20.86■□□□□ 0.93
SLC4A4Q9Y6R1 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms