Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGA11Q9Y5H2 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGA11Q9Y5H2 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA11Q9Y5H2 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA11Q9Y5H2 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA11Q9Y5H2 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA11Q9Y5H2 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA11Q9Y5H2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGA11Q9Y5H2 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA11Q9Y5H2 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGA11Q9Y5H2 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGA11Q9Y5H2 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA11Q9Y5H2 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA11Q9Y5H2 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA11Q9Y5H2 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGA11Q9Y5H2 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGA11Q9Y5H2 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.05■□□□□ 0.32
PCDHGA11Q9Y5H2 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.05■□□□□ 0.32
PCDHGA11Q9Y5H2 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA11Q9Y5H2 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA11Q9Y5H2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PCDHGA11Q9Y5H2 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA11Q9Y5H2 AL391005.1-201ENST00000623953 2435 ntBASIC17.05■□□□□ 0.32
PCDHGA11Q9Y5H2 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGA11Q9Y5H2 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PCDHGA11Q9Y5H2 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA11Q9Y5H2 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PCDHGA11Q9Y5H2 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA11Q9Y5H2 AL023806.1-201ENST00000603994 1649 ntBASIC17.04■□□□□ 0.32
PCDHGA11Q9Y5H2 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA11Q9Y5H2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGA11Q9Y5H2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA11Q9Y5H2 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA11Q9Y5H2 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA11Q9Y5H2 AC005104.2-201ENST00000427818 678 ntBASIC17.04■□□□□ 0.32
PCDHGA11Q9Y5H2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA11Q9Y5H2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA11Q9Y5H2 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGA11Q9Y5H2 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
PCDHGA11Q9Y5H2 NTF6B-201ENST00000591913 560 ntBASIC17.04■□□□□ 0.32
PCDHGA11Q9Y5H2 IGHV3-41-201ENST00000613121 348 ntBASIC17.04■□□□□ 0.32
PCDHGA11Q9Y5H2 AC124864.1-201ENST00000623408 392 ntBASIC17.04■□□□□ 0.32
PCDHGA11Q9Y5H2 AL590326.2-201ENST00000625139 305 ntBASIC17.04■□□□□ 0.32
PCDHGA11Q9Y5H2 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHGA11Q9Y5H2 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA11Q9Y5H2 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGA11Q9Y5H2 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA11Q9Y5H2 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
PCDHGA11Q9Y5H2 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PCDHGA11Q9Y5H2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA11Q9Y5H2 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA11Q9Y5H2 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PCDHGA11Q9Y5H2 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA11Q9Y5H2 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA11Q9Y5H2 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA11Q9Y5H2 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA11Q9Y5H2 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 AL592071.1-201ENST00000611956 408 ntBASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA11Q9Y5H2 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDHGA11Q9Y5H2 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA11Q9Y5H2 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA11Q9Y5H2 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PCDHGA11Q9Y5H2 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA11Q9Y5H2 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PCDHGA11Q9Y5H2 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms