Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 AP002414.3-201ENST00000589352 1468 ntBASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 AC007967.3-201ENST00000434308 558 ntBASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 AC004967.1-201ENST00000453589 447 ntBASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 MIR1199-201ENST00000621445 119 ntBASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA9Q9Y5G4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
PCDHGA9Q9Y5G4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.39■□□□□ 0.22
PCDHGA9Q9Y5G4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.39■□□□□ 0.22
PCDHGA9Q9Y5G4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 AC139713.2-201ENST00000641328 2723 ntBASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 PMS2P2-201ENST00000425039 1128 ntBASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 AC009947.1-201ENST00000444350 727 ntBASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 PRYP5-201ENST00000451909 266 ntBASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 AC112482.1-201ENST00000492080 688 ntBASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 AC122714.2-201ENST00000502787 707 ntBASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms