Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
PCDHB11Q9Y5F2 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PCDHB11Q9Y5F2 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB11Q9Y5F2 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB11Q9Y5F2 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHB11Q9Y5F2 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PCDHB11Q9Y5F2 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB11Q9Y5F2 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.22■□□□□ 0.35
PCDHB11Q9Y5F2 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.22■□□□□ 0.35
PCDHB11Q9Y5F2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB11Q9Y5F2 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB11Q9Y5F2 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB11Q9Y5F2 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PCDHB11Q9Y5F2 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB11Q9Y5F2 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB11Q9Y5F2 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.22■□□□□ 0.35
PCDHB11Q9Y5F2 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
PCDHB11Q9Y5F2 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB11Q9Y5F2 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB11Q9Y5F2 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHB11Q9Y5F2 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB11Q9Y5F2 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHB11Q9Y5F2 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.22■□□□□ 0.35
PCDHB11Q9Y5F2 AC009533.2-201ENST00000543664 586 ntBASIC17.22■□□□□ 0.35
PCDHB11Q9Y5F2 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHB11Q9Y5F2 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.22■□□□□ 0.35
PCDHB11Q9Y5F2 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB11Q9Y5F2 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB11Q9Y5F2 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHB11Q9Y5F2 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHB11Q9Y5F2 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB11Q9Y5F2 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHB11Q9Y5F2 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB11Q9Y5F2 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PCDHB11Q9Y5F2 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB11Q9Y5F2 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB11Q9Y5F2 AC097374.2-201ENST00000618617 1306 ntBASIC17.21■□□□□ 0.35
PCDHB11Q9Y5F2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB11Q9Y5F2 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB11Q9Y5F2 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PCDHB11Q9Y5F2 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHB11Q9Y5F2 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB11Q9Y5F2 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB11Q9Y5F2 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHB11Q9Y5F2 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB11Q9Y5F2 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB11Q9Y5F2 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
PCDHB11Q9Y5F2 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB11Q9Y5F2 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
PCDHB11Q9Y5F2 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PCDHB11Q9Y5F2 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB11Q9Y5F2 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB11Q9Y5F2 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB11Q9Y5F2 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB11Q9Y5F2 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB11Q9Y5F2 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
PCDHB11Q9Y5F2 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB11Q9Y5F2 AC132008.2-207ENST00000454517 770 ntBASIC17.21■□□□□ 0.35
PCDHB11Q9Y5F2 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHB11Q9Y5F2 AC092865.5-201ENST00000545435 363 ntBASIC17.21■□□□□ 0.35
PCDHB11Q9Y5F2 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB11Q9Y5F2 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHB11Q9Y5F2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.21■□□□□ 0.35
PCDHB11Q9Y5F2 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHB11Q9Y5F2 AC005336.2-201ENST00000593183 939 ntBASIC17.21■□□□□ 0.35
PCDHB11Q9Y5F2 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB11Q9Y5F2 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHB11Q9Y5F2 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB11Q9Y5F2 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
PCDHB11Q9Y5F2 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB11Q9Y5F2 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.21■□□□□ 0.34
PCDHB11Q9Y5F2 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.21■□□□□ 0.34
PCDHB11Q9Y5F2 AC125634.1-201ENST00000438758 1403 ntBASIC17.21■□□□□ 0.34
PCDHB11Q9Y5F2 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.21■□□□□ 0.34
PCDHB11Q9Y5F2 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PCDHB11Q9Y5F2 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 ZNF259P1-201ENST00000407656 1365 ntBASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 AC096633.1-201ENST00000422446 749 ntBASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 SCARNA2-201ENST00000458748 420 ntBASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 TERC-201ENST00000602385 541 ntBASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 AL671883.3-201ENST00000603274 991 ntBASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 AL138831.2-201ENST00000606564 490 ntBASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms