Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
YIPF1Q9Y548 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
YIPF1Q9Y548 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
YIPF1Q9Y548 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
YIPF1Q9Y548 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
YIPF1Q9Y548 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
YIPF1Q9Y548 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.26■□□□□ 0.51
YIPF1Q9Y548 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.26■□□□□ 0.51
YIPF1Q9Y548 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
YIPF1Q9Y548 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.25■□□□□ 0.51
YIPF1Q9Y548 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
YIPF1Q9Y548 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
YIPF1Q9Y548 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.25■□□□□ 0.51
YIPF1Q9Y548 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.25■□□□□ 0.51
YIPF1Q9Y548 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.25■□□□□ 0.51
YIPF1Q9Y548 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
YIPF1Q9Y548 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
YIPF1Q9Y548 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
YIPF1Q9Y548 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.25■□□□□ 0.51
YIPF1Q9Y548 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
YIPF1Q9Y548 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.25■□□□□ 0.51
YIPF1Q9Y548 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.25■□□□□ 0.51
YIPF1Q9Y548 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.25■□□□□ 0.51
YIPF1Q9Y548 GGTLC5P-201ENST00000617623 998 ntBASIC18.25■□□□□ 0.51
YIPF1Q9Y548 AL513190.1-201ENST00000621254 727 ntBASIC18.25■□□□□ 0.51
YIPF1Q9Y548 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
YIPF1Q9Y548 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
YIPF1Q9Y548 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
YIPF1Q9Y548 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
YIPF1Q9Y548 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
YIPF1Q9Y548 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
YIPF1Q9Y548 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.25■□□□□ 0.51
YIPF1Q9Y548 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
YIPF1Q9Y548 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
YIPF1Q9Y548 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.25■□□□□ 0.51
YIPF1Q9Y548 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
YIPF1Q9Y548 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
YIPF1Q9Y548 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
YIPF1Q9Y548 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
YIPF1Q9Y548 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
YIPF1Q9Y548 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
YIPF1Q9Y548 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
YIPF1Q9Y548 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
YIPF1Q9Y548 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YIPF1Q9Y548 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.24■□□□□ 0.51
YIPF1Q9Y548 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YIPF1Q9Y548 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.24■□□□□ 0.51
YIPF1Q9Y548 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YIPF1Q9Y548 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
YIPF1Q9Y548 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
YIPF1Q9Y548 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YIPF1Q9Y548 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YIPF1Q9Y548 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.24■□□□□ 0.51
YIPF1Q9Y548 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.24■□□□□ 0.51
YIPF1Q9Y548 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.24■□□□□ 0.51
YIPF1Q9Y548 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
YIPF1Q9Y548 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
YIPF1Q9Y548 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
YIPF1Q9Y548 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.24■□□□□ 0.51
YIPF1Q9Y548 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.24■□□□□ 0.51
YIPF1Q9Y548 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
YIPF1Q9Y548 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YIPF1Q9Y548 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
YIPF1Q9Y548 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.24■□□□□ 0.51
YIPF1Q9Y548 RPS8P6-201ENST00000426177 609 ntBASIC18.24■□□□□ 0.51
YIPF1Q9Y548 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.24■□□□□ 0.51
YIPF1Q9Y548 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.24■□□□□ 0.51
YIPF1Q9Y548 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.24■□□□□ 0.51
YIPF1Q9Y548 OR7E47P-204ENST00000575924 449 ntBASIC18.24■□□□□ 0.51
YIPF1Q9Y548 AC010507.1-201ENST00000633895 436 ntBASIC18.24■□□□□ 0.51
YIPF1Q9Y548 AC134684.3-201ENST00000641758 218 ntBASIC18.24■□□□□ 0.51
YIPF1Q9Y548 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
YIPF1Q9Y548 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
YIPF1Q9Y548 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.24■□□□□ 0.51
YIPF1Q9Y548 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
YIPF1Q9Y548 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.24■□□□□ 0.51
YIPF1Q9Y548 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YIPF1Q9Y548 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YIPF1Q9Y548 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
YIPF1Q9Y548 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YIPF1Q9Y548 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
YIPF1Q9Y548 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YIPF1Q9Y548 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
YIPF1Q9Y548 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
YIPF1Q9Y548 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
YIPF1Q9Y548 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
YIPF1Q9Y548 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.23■□□□□ 0.51
YIPF1Q9Y548 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YIPF1Q9Y548 AL135999.2-201ENST00000622438 1686 ntBASIC18.23■□□□□ 0.51
YIPF1Q9Y548 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
YIPF1Q9Y548 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.23■□□□□ 0.51
YIPF1Q9Y548 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.23■□□□□ 0.51
YIPF1Q9Y548 ALG1L5P-201ENST00000482043 771 ntBASIC18.23■□□□□ 0.51
YIPF1Q9Y548 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.23■□□□□ 0.51
YIPF1Q9Y548 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.23■□□□□ 0.51
YIPF1Q9Y548 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.23■□□□□ 0.51
YIPF1Q9Y548 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YIPF1Q9Y548 AP001160.2-201ENST00000596071 487 ntBASIC18.23■□□□□ 0.51
YIPF1Q9Y548 AL139327.4-201ENST00000612362 153 ntBASIC18.23■□□□□ 0.51
YIPF1Q9Y548 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms