Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.8■□□□□ 0.6
UBQLN1Q9UMX0 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBQLN1Q9UMX0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBQLN1Q9UMX0 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBQLN1Q9UMX0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBQLN1Q9UMX0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBQLN1Q9UMX0 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
UBQLN1Q9UMX0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBQLN1Q9UMX0 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
UBQLN1Q9UMX0 KRT18P27-201ENST00000427733 1299 ntBASIC18.8■□□□□ 0.6
UBQLN1Q9UMX0 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.8■□□□□ 0.6
UBQLN1Q9UMX0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.8■□□□□ 0.6
UBQLN1Q9UMX0 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.8■□□□□ 0.6
UBQLN1Q9UMX0 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.8■□□□□ 0.6
UBQLN1Q9UMX0 AC004706.3-202ENST00000621574 984 ntBASIC18.8■□□□□ 0.6
UBQLN1Q9UMX0 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.8■□□□□ 0.6
UBQLN1Q9UMX0 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBQLN1Q9UMX0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBQLN1Q9UMX0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
UBQLN1Q9UMX0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBQLN1Q9UMX0 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBQLN1Q9UMX0 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBQLN1Q9UMX0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.8■□□□□ 0.6
UBQLN1Q9UMX0 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.8■□□□□ 0.6
UBQLN1Q9UMX0 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
UBQLN1Q9UMX0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBQLN1Q9UMX0 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBQLN1Q9UMX0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
UBQLN1Q9UMX0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
UBQLN1Q9UMX0 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.79■□□□□ 0.6
UBQLN1Q9UMX0 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBQLN1Q9UMX0 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.79■□□□□ 0.6
UBQLN1Q9UMX0 AC098831.1-202ENST00000438821 336 ntBASIC18.79■□□□□ 0.6
UBQLN1Q9UMX0 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.79■□□□□ 0.6
UBQLN1Q9UMX0 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.79■□□□□ 0.6
UBQLN1Q9UMX0 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.79■□□□□ 0.6
UBQLN1Q9UMX0 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.79■□□□□ 0.6
UBQLN1Q9UMX0 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
UBQLN1Q9UMX0 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBQLN1Q9UMX0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBQLN1Q9UMX0 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBQLN1Q9UMX0 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBQLN1Q9UMX0 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
UBQLN1Q9UMX0 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBQLN1Q9UMX0 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBQLN1Q9UMX0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBQLN1Q9UMX0 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBQLN1Q9UMX0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.79■□□□□ 0.6
UBQLN1Q9UMX0 AC046185.3-201ENST00000623228 1824 ntBASIC18.79■□□□□ 0.6
UBQLN1Q9UMX0 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBQLN1Q9UMX0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBQLN1Q9UMX0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 AP002414.3-201ENST00000589352 1468 ntBASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 AL355312.1-201ENST00000407115 2176 ntBASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 IGHV3-22-201ENST00000520721 359 ntBASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 MIR1199-201ENST00000621445 119 ntBASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 AC097637.2-201ENST00000624096 1997 ntBASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 AC133963.1-201ENST00000504166 1679 ntBASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 RNF165-205ENST00000588679 2904 ntBASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.78■□□□□ 0.6
UBQLN1Q9UMX0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBQLN1Q9UMX0 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
UBQLN1Q9UMX0 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms