Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC012313.1-201ENST00000593393 3059 ntBASIC19.48■□□□□ 0.71
BLOC1S4Q9NUP1 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.48■□□□□ 0.71
BLOC1S4Q9NUP1 AC106820.2-201ENST00000563775 3264 ntBASIC19.48■□□□□ 0.71
BLOC1S4Q9NUP1 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
BLOC1S4Q9NUP1 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BLOC1S4Q9NUP1 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BLOC1S4Q9NUP1 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BLOC1S4Q9NUP1 AC003669.1-201ENST00000334569 611 ntBASIC19.48■□□□□ 0.71
BLOC1S4Q9NUP1 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.48■□□□□ 0.71
BLOC1S4Q9NUP1 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BLOC1S4Q9NUP1 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.48■□□□□ 0.71
BLOC1S4Q9NUP1 KLF4P1-201ENST00000412782 1185 ntBASIC19.48■□□□□ 0.71
BLOC1S4Q9NUP1 STK19B-204ENST00000512515 211 ntBASIC19.48■□□□□ 0.71
BLOC1S4Q9NUP1 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.48■□□□□ 0.71
BLOC1S4Q9NUP1 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.48■□□□□ 0.71
BLOC1S4Q9NUP1 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BLOC1S4Q9NUP1 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BLOC1S4Q9NUP1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
BLOC1S4Q9NUP1 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
BLOC1S4Q9NUP1 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
BLOC1S4Q9NUP1 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.48■□□□□ 0.71
BLOC1S4Q9NUP1 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
BLOC1S4Q9NUP1 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
BLOC1S4Q9NUP1 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BLOC1S4Q9NUP1 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BLOC1S4Q9NUP1 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
BLOC1S4Q9NUP1 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BLOC1S4Q9NUP1 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BLOC1S4Q9NUP1 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
BLOC1S4Q9NUP1 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BLOC1S4Q9NUP1 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.47■□□□□ 0.71
BLOC1S4Q9NUP1 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
BLOC1S4Q9NUP1 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
BLOC1S4Q9NUP1 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
BLOC1S4Q9NUP1 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.47■□□□□ 0.71
BLOC1S4Q9NUP1 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BLOC1S4Q9NUP1 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BLOC1S4Q9NUP1 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BLOC1S4Q9NUP1 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
BLOC1S4Q9NUP1 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.47■□□□□ 0.71
BLOC1S4Q9NUP1 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.47■□□□□ 0.71
BLOC1S4Q9NUP1 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
BLOC1S4Q9NUP1 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
BLOC1S4Q9NUP1 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BLOC1S4Q9NUP1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BLOC1S4Q9NUP1 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
BLOC1S4Q9NUP1 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
BLOC1S4Q9NUP1 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
BLOC1S4Q9NUP1 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.47■□□□□ 0.71
BLOC1S4Q9NUP1 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BLOC1S4Q9NUP1 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BLOC1S4Q9NUP1 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BLOC1S4Q9NUP1 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.46■□□□□ 0.71
BLOC1S4Q9NUP1 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
BLOC1S4Q9NUP1 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
BLOC1S4Q9NUP1 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
BLOC1S4Q9NUP1 AL135999.2-201ENST00000622438 1686 ntBASIC19.46■□□□□ 0.71
BLOC1S4Q9NUP1 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BLOC1S4Q9NUP1 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
BLOC1S4Q9NUP1 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BLOC1S4Q9NUP1 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
BLOC1S4Q9NUP1 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
BLOC1S4Q9NUP1 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
BLOC1S4Q9NUP1 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
BLOC1S4Q9NUP1 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
BLOC1S4Q9NUP1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
BLOC1S4Q9NUP1 AP005117.1-201ENST00000584346 1413 ntBASIC19.46■□□□□ 0.71
BLOC1S4Q9NUP1 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
BLOC1S4Q9NUP1 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
BLOC1S4Q9NUP1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BLOC1S4Q9NUP1 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.46■□□□□ 0.71
BLOC1S4Q9NUP1 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
BLOC1S4Q9NUP1 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
BLOC1S4Q9NUP1 SPDYE21P-201ENST00000413323 827 ntBASIC19.46■□□□□ 0.71
BLOC1S4Q9NUP1 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
BLOC1S4Q9NUP1 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.46■□□□□ 0.71
BLOC1S4Q9NUP1 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.46■□□□□ 0.71
BLOC1S4Q9NUP1 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.46■□□□□ 0.71
BLOC1S4Q9NUP1 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BLOC1S4Q9NUP1 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
BLOC1S4Q9NUP1 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
BLOC1S4Q9NUP1 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.46■□□□□ 0.71
BLOC1S4Q9NUP1 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
BLOC1S4Q9NUP1 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.46■□□□□ 0.71
BLOC1S4Q9NUP1 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
BLOC1S4Q9NUP1 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
BLOC1S4Q9NUP1 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BLOC1S4Q9NUP1 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.45■□□□□ 0.7
BLOC1S4Q9NUP1 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.45■□□□□ 0.7
BLOC1S4Q9NUP1 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.45■□□□□ 0.7
BLOC1S4Q9NUP1 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BLOC1S4Q9NUP1 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BLOC1S4Q9NUP1 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
BLOC1S4Q9NUP1 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
BLOC1S4Q9NUP1 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
BLOC1S4Q9NUP1 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.45■□□□□ 0.7
BLOC1S4Q9NUP1 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.45■□□□□ 0.7
BLOC1S4Q9NUP1 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BLOC1S4Q9NUP1 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BLOC1S4Q9NUP1 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms