Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS45Q9NRW7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS45Q9NRW7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VPS45Q9NRW7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.13■□□□□ 0.49
VPS45Q9NRW7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS45Q9NRW7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.13■□□□□ 0.49
VPS45Q9NRW7 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.13■□□□□ 0.49
VPS45Q9NRW7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
VPS45Q9NRW7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.13■□□□□ 0.49
VPS45Q9NRW7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.13■□□□□ 0.49
VPS45Q9NRW7 AC068472.1-201ENST00000474589 881 ntBASIC18.13■□□□□ 0.49
VPS45Q9NRW7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.13■□□□□ 0.49
VPS45Q9NRW7 AC027601.4-201ENST00000611259 610 ntBASIC18.13■□□□□ 0.49
VPS45Q9NRW7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
VPS45Q9NRW7 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VPS45Q9NRW7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
VPS45Q9NRW7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS45Q9NRW7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS45Q9NRW7 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS45Q9NRW7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS45Q9NRW7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS45Q9NRW7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS45Q9NRW7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
VPS45Q9NRW7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
VPS45Q9NRW7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS45Q9NRW7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS45Q9NRW7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS45Q9NRW7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS45Q9NRW7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS45Q9NRW7 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.12■□□□□ 0.49
VPS45Q9NRW7 AC098831.1-202ENST00000438821 336 ntBASIC18.12■□□□□ 0.49
VPS45Q9NRW7 MTCL1P1-201ENST00000446207 792 ntBASIC18.12■□□□□ 0.49
VPS45Q9NRW7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.12■□□□□ 0.49
VPS45Q9NRW7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.12■□□□□ 0.49
VPS45Q9NRW7 PGAM5P1-201ENST00000518923 814 ntBASIC18.12■□□□□ 0.49
VPS45Q9NRW7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.12■□□□□ 0.49
VPS45Q9NRW7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.12■□□□□ 0.49
VPS45Q9NRW7 AC140113.2-201ENST00000604370 208 ntBASIC18.12■□□□□ 0.49
VPS45Q9NRW7 AL355385.1-201ENST00000606123 409 ntBASIC18.12■□□□□ 0.49
VPS45Q9NRW7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.12■□□□□ 0.49
VPS45Q9NRW7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
VPS45Q9NRW7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS45Q9NRW7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS45Q9NRW7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.12■□□□□ 0.49
VPS45Q9NRW7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
VPS45Q9NRW7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.12■□□□□ 0.49
VPS45Q9NRW7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.12■□□□□ 0.49
VPS45Q9NRW7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS45Q9NRW7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.12■□□□□ 0.49
VPS45Q9NRW7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VPS45Q9NRW7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS45Q9NRW7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
VPS45Q9NRW7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.11■□□□□ 0.49
VPS45Q9NRW7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
VPS45Q9NRW7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS45Q9NRW7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
VPS45Q9NRW7 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS45Q9NRW7 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.11■□□□□ 0.49
VPS45Q9NRW7 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
VPS45Q9NRW7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.11■□□□□ 0.49
VPS45Q9NRW7 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.11■□□□□ 0.49
VPS45Q9NRW7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VPS45Q9NRW7 UPF3AP3-201ENST00000420996 769 ntBASIC18.11■□□□□ 0.49
VPS45Q9NRW7 PMS2P2-201ENST00000425039 1128 ntBASIC18.11■□□□□ 0.49
VPS45Q9NRW7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.11■□□□□ 0.49
VPS45Q9NRW7 DDX43P3-201ENST00000441064 443 ntBASIC18.11■□□□□ 0.49
VPS45Q9NRW7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.11■□□□□ 0.49
VPS45Q9NRW7 FGFR3P6-201ENST00000457012 610 ntBASIC18.11■□□□□ 0.49
VPS45Q9NRW7 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.11■□□□□ 0.49
VPS45Q9NRW7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.11■□□□□ 0.49
VPS45Q9NRW7 AC145285.3-201ENST00000564603 959 ntBASIC18.11■□□□□ 0.49
VPS45Q9NRW7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VPS45Q9NRW7 FAM197Y3-203ENST00000618346 717 ntBASIC18.11■□□□□ 0.49
VPS45Q9NRW7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.11■□□□□ 0.49
VPS45Q9NRW7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.11■□□□□ 0.49
VPS45Q9NRW7 KRT8P47-201ENST00000604727 1398 ntBASIC18.11■□□□□ 0.49
VPS45Q9NRW7 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS45Q9NRW7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
VPS45Q9NRW7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.11■□□□□ 0.49
VPS45Q9NRW7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS45Q9NRW7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS45Q9NRW7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VPS45Q9NRW7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
VPS45Q9NRW7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS45Q9NRW7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS45Q9NRW7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS45Q9NRW7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VPS45Q9NRW7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS45Q9NRW7 AC012317.2-201ENST00000623305 2251 ntBASIC18.1■□□□□ 0.49
VPS45Q9NRW7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS45Q9NRW7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VPS45Q9NRW7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
VPS45Q9NRW7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VPS45Q9NRW7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VPS45Q9NRW7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS45Q9NRW7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.1■□□□□ 0.49
VPS45Q9NRW7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VPS45Q9NRW7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VPS45Q9NRW7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.1■□□□□ 0.49
VPS45Q9NRW7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms