Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CDC42SE2Q9NRR3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CDC42SE2Q9NRR3 AL391807.1-203ENST00000604392 2365 ntBASIC12.11□□□□□ -0.47
CDC42SE2Q9NRR3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CDC42SE2Q9NRR3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 DDT-203ENST00000403754 569 ntTSL 3 BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 DDT-206ENST00000430101 573 ntTSL 2 BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 MIR4497-201ENST00000583208 89 ntBASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 AL139327.4-201ENST00000612362 153 ntBASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 AC004263.2-201ENST00000617183 678 ntBASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 AC141257.4-201ENST00000634557 245 ntBASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 AC136944.6-201ENST00000634818 245 ntBASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC12.1□□□□□ -0.47
CDC42SE2Q9NRR3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 RASA4DP-201ENST00000460726 1199 ntBASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 AL136038.4-201ENST00000603606 1261 ntBASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms