Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN4Q9NQC3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RTN4Q9NQC3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN4Q9NQC3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RTN4Q9NQC3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.77■□□□□ 0.92
RTN4Q9NQC3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RTN4Q9NQC3 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTN4Q9NQC3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTN4Q9NQC3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTN4Q9NQC3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.77■□□□□ 0.92
RTN4Q9NQC3 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTN4Q9NQC3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RTN4Q9NQC3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.77■□□□□ 0.92
RTN4Q9NQC3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTN4Q9NQC3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RTN4Q9NQC3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.77■□□□□ 0.92
RTN4Q9NQC3 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTN4Q9NQC3 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTN4Q9NQC3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTN4Q9NQC3 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RTN4Q9NQC3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RTN4Q9NQC3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTN4Q9NQC3 UNC93B4-201ENST00000505679 747 ntBASIC20.77■□□□□ 0.92
RTN4Q9NQC3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTN4Q9NQC3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC20.77■□□□□ 0.92
RTN4Q9NQC3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
RTN4Q9NQC3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
RTN4Q9NQC3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RTN4Q9NQC3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RTN4Q9NQC3 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RTN4Q9NQC3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RTN4Q9NQC3 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RTN4Q9NQC3 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RTN4Q9NQC3 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.91
RTN4Q9NQC3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RTN4Q9NQC3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.76■□□□□ 0.91
RTN4Q9NQC3 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTN4Q9NQC3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC20.76■□□□□ 0.91
RTN4Q9NQC3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTN4Q9NQC3 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTN4Q9NQC3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTN4Q9NQC3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTN4Q9NQC3 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RTN4Q9NQC3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTN4Q9NQC3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RTN4Q9NQC3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.76■□□□□ 0.91
RTN4Q9NQC3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.76■□□□□ 0.91
RTN4Q9NQC3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTN4Q9NQC3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.76■□□□□ 0.91
RTN4Q9NQC3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RTN4Q9NQC3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.76■□□□□ 0.91
RTN4Q9NQC3 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RTN4Q9NQC3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.76■□□□□ 0.91
RTN4Q9NQC3 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTN4Q9NQC3 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.76■□□□□ 0.91
RTN4Q9NQC3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RTN4Q9NQC3 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RTN4Q9NQC3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
RTN4Q9NQC3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTN4Q9NQC3 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTN4Q9NQC3 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTN4Q9NQC3 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTN4Q9NQC3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
RTN4Q9NQC3 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RTN4Q9NQC3 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC20.76■□□□□ 0.91
RTN4Q9NQC3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.76■□□□□ 0.91
RTN4Q9NQC3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTN4Q9NQC3 AC007686.3-201ENST00000619017 3487 ntBASIC20.76■□□□□ 0.91
RTN4Q9NQC3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTN4Q9NQC3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTN4Q9NQC3 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTN4Q9NQC3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.75■□□□□ 0.91
RTN4Q9NQC3 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTN4Q9NQC3 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTN4Q9NQC3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTN4Q9NQC3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTN4Q9NQC3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTN4Q9NQC3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
RTN4Q9NQC3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RTN4Q9NQC3 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTN4Q9NQC3 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTN4Q9NQC3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTN4Q9NQC3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
RTN4Q9NQC3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.75■□□□□ 0.91
RTN4Q9NQC3 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RTN4Q9NQC3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RTN4Q9NQC3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTN4Q9NQC3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTN4Q9NQC3 MIR935-201ENST00000401179 91 ntBASIC20.75■□□□□ 0.91
RTN4Q9NQC3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.75■□□□□ 0.91
RTN4Q9NQC3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTN4Q9NQC3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.75■□□□□ 0.91
RTN4Q9NQC3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.75■□□□□ 0.91
RTN4Q9NQC3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.75■□□□□ 0.91
RTN4Q9NQC3 C1QL1P1-201ENST00000568105 661 ntBASIC20.75■□□□□ 0.91
RTN4Q9NQC3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.75■□□□□ 0.91
RTN4Q9NQC3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.75■□□□□ 0.91
RTN4Q9NQC3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTN4Q9NQC3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTN4Q9NQC3 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms