Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
C12orf4Q9NQ89 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
C12orf4Q9NQ89 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
C12orf4Q9NQ89 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
C12orf4Q9NQ89 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
C12orf4Q9NQ89 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
C12orf4Q9NQ89 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
C12orf4Q9NQ89 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
C12orf4Q9NQ89 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
C12orf4Q9NQ89 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.34■□□□□ 0.05
C12orf4Q9NQ89 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.34■□□□□ 0.05
C12orf4Q9NQ89 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
C12orf4Q9NQ89 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
C12orf4Q9NQ89 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
C12orf4Q9NQ89 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
C12orf4Q9NQ89 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
C12orf4Q9NQ89 LINC02199-201ENST00000506655 2702 ntBASIC15.33■□□□□ 0.05
C12orf4Q9NQ89 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
C12orf4Q9NQ89 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
C12orf4Q9NQ89 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C12orf4Q9NQ89 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C12orf4Q9NQ89 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C12orf4Q9NQ89 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C12orf4Q9NQ89 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C12orf4Q9NQ89 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
C12orf4Q9NQ89 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.33■□□□□ 0.04
C12orf4Q9NQ89 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.33■□□□□ 0.04
C12orf4Q9NQ89 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
C12orf4Q9NQ89 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.33■□□□□ 0.04
C12orf4Q9NQ89 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.33■□□□□ 0.04
C12orf4Q9NQ89 MIR4674-201ENST00000582457 87 ntBASIC15.33■□□□□ 0.04
C12orf4Q9NQ89 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.33■□□□□ 0.04
C12orf4Q9NQ89 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.33■□□□□ 0.04
C12orf4Q9NQ89 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
C12orf4Q9NQ89 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C12orf4Q9NQ89 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.33■□□□□ 0.04
C12orf4Q9NQ89 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
C12orf4Q9NQ89 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C12orf4Q9NQ89 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
C12orf4Q9NQ89 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
C12orf4Q9NQ89 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
C12orf4Q9NQ89 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C12orf4Q9NQ89 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
C12orf4Q9NQ89 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C12orf4Q9NQ89 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 AC093010.1-201ENST00000473625 1624 ntBASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 FAM201B-201ENST00000458407 597 ntBASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 AP001412.1-201ENST00000608405 714 ntBASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
C12orf4Q9NQ89 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms