Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
UPF3BQ9BZI7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.94■□□□□ 0.94
UPF3BQ9BZI7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPF3BQ9BZI7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPF3BQ9BZI7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.94■□□□□ 0.94
UPF3BQ9BZI7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.94■□□□□ 0.94
UPF3BQ9BZI7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
UPF3BQ9BZI7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPF3BQ9BZI7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.94■□□□□ 0.94
UPF3BQ9BZI7 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.94■□□□□ 0.94
UPF3BQ9BZI7 AL845331.1-201ENST00000424978 1190 ntBASIC20.94■□□□□ 0.94
UPF3BQ9BZI7 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
UPF3BQ9BZI7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.94■□□□□ 0.94
UPF3BQ9BZI7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.94■□□□□ 0.94
UPF3BQ9BZI7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPF3BQ9BZI7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
UPF3BQ9BZI7 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPF3BQ9BZI7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPF3BQ9BZI7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.94■□□□□ 0.94
UPF3BQ9BZI7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPF3BQ9BZI7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPF3BQ9BZI7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPF3BQ9BZI7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.94■□□□□ 0.94
UPF3BQ9BZI7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.94■□□□□ 0.94
UPF3BQ9BZI7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
UPF3BQ9BZI7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
UPF3BQ9BZI7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.93■□□□□ 0.94
UPF3BQ9BZI7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
UPF3BQ9BZI7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
UPF3BQ9BZI7 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.93■□□□□ 0.94
UPF3BQ9BZI7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.93■□□□□ 0.94
UPF3BQ9BZI7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
UPF3BQ9BZI7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
UPF3BQ9BZI7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
UPF3BQ9BZI7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UPF3BQ9BZI7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
UPF3BQ9BZI7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UPF3BQ9BZI7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
UPF3BQ9BZI7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
UPF3BQ9BZI7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UPF3BQ9BZI7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.93■□□□□ 0.94
UPF3BQ9BZI7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.93■□□□□ 0.94
UPF3BQ9BZI7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
UPF3BQ9BZI7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
UPF3BQ9BZI7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.93■□□□□ 0.94
UPF3BQ9BZI7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UPF3BQ9BZI7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UPF3BQ9BZI7 AC011676.5-201ENST00000624864 2660 ntBASIC20.93■□□□□ 0.94
UPF3BQ9BZI7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
UPF3BQ9BZI7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.93■□□□□ 0.94
UPF3BQ9BZI7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
UPF3BQ9BZI7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UPF3BQ9BZI7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
UPF3BQ9BZI7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.93■□□□□ 0.94
UPF3BQ9BZI7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.93■□□□□ 0.94
UPF3BQ9BZI7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
UPF3BQ9BZI7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UPF3BQ9BZI7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 RN7SL606P-201ENST00000472779 293 ntBASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 AL592071.1-201ENST00000611956 408 ntBASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 NKILA-202ENST00000614771 2598 ntBASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UPF3BQ9BZI7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UPF3BQ9BZI7 AC084018.2-201ENST00000613093 2607 ntBASIC20.91■□□□□ 0.94
UPF3BQ9BZI7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
UPF3BQ9BZI7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms