Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM54Q9BYV2 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM54Q9BYV2 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM54Q9BYV2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM54Q9BYV2 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM54Q9BYV2 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM54Q9BYV2 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM54Q9BYV2 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM54Q9BYV2 AC080080.1-201ENST00000625121 2420 ntBASIC17.36■□□□□ 0.37
TRIM54Q9BYV2 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM54Q9BYV2 HLA-J-201ENST00000462773 1622 ntBASIC17.36■□□□□ 0.37
TRIM54Q9BYV2 AL023806.1-201ENST00000603994 1649 ntBASIC17.36■□□□□ 0.37
TRIM54Q9BYV2 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM54Q9BYV2 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM54Q9BYV2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TRIM54Q9BYV2 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.35■□□□□ 0.37
TRIM54Q9BYV2 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM54Q9BYV2 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM54Q9BYV2 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TRIM54Q9BYV2 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM54Q9BYV2 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRIM54Q9BYV2 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM54Q9BYV2 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.35■□□□□ 0.37
TRIM54Q9BYV2 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.35■□□□□ 0.37
TRIM54Q9BYV2 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.35■□□□□ 0.37
TRIM54Q9BYV2 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM54Q9BYV2 AL121672.3-201ENST00000608644 468 ntBASIC17.35■□□□□ 0.37
TRIM54Q9BYV2 AC097374.2-201ENST00000618617 1306 ntBASIC17.35■□□□□ 0.37
TRIM54Q9BYV2 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM54Q9BYV2 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM54Q9BYV2 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM54Q9BYV2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.35■□□□□ 0.37
TRIM54Q9BYV2 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.35■□□□□ 0.37
TRIM54Q9BYV2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM54Q9BYV2 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.35■□□□□ 0.37
TRIM54Q9BYV2 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
TRIM54Q9BYV2 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM54Q9BYV2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRIM54Q9BYV2 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM54Q9BYV2 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
TRIM54Q9BYV2 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TRIM54Q9BYV2 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TRIM54Q9BYV2 AC099398.1-201ENST00000567919 2776 ntBASIC17.34■□□□□ 0.37
TRIM54Q9BYV2 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM54Q9BYV2 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM54Q9BYV2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM54Q9BYV2 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM54Q9BYV2 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM54Q9BYV2 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM54Q9BYV2 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM54Q9BYV2 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM54Q9BYV2 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM54Q9BYV2 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.34■□□□□ 0.37
TRIM54Q9BYV2 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM54Q9BYV2 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM54Q9BYV2 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TRIM54Q9BYV2 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM54Q9BYV2 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.34■□□□□ 0.37
TRIM54Q9BYV2 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM54Q9BYV2 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.34■□□□□ 0.37
TRIM54Q9BYV2 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM54Q9BYV2 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM54Q9BYV2 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM54Q9BYV2 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM54Q9BYV2 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
TRIM54Q9BYV2 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM54Q9BYV2 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM54Q9BYV2 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TRIM54Q9BYV2 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM54Q9BYV2 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM54Q9BYV2 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TRIM54Q9BYV2 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM54Q9BYV2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.33■□□□□ 0.37
TRIM54Q9BYV2 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM54Q9BYV2 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TRIM54Q9BYV2 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM54Q9BYV2 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.33■□□□□ 0.37
TRIM54Q9BYV2 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM54Q9BYV2 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.33■□□□□ 0.37
TRIM54Q9BYV2 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.33■□□□□ 0.37
TRIM54Q9BYV2 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM54Q9BYV2 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIM54Q9BYV2 AC005332.1-201ENST00000577698 1310 ntBASIC17.33■□□□□ 0.36
TRIM54Q9BYV2 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
TRIM54Q9BYV2 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM54Q9BYV2 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM54Q9BYV2 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM54Q9BYV2 AC096633.1-201ENST00000422446 749 ntBASIC17.33■□□□□ 0.36
TRIM54Q9BYV2 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM54Q9BYV2 VENTXP7-201ENST00000475503 772 ntBASIC17.33■□□□□ 0.36
TRIM54Q9BYV2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.33■□□□□ 0.36
TRIM54Q9BYV2 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.33■□□□□ 0.36
TRIM54Q9BYV2 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM54Q9BYV2 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIM54Q9BYV2 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.33■□□□□ 0.36
TRIM54Q9BYV2 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.33■□□□□ 0.36
TRIM54Q9BYV2 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM54Q9BYV2 AL592071.1-201ENST00000611956 408 ntBASIC17.33■□□□□ 0.36
TRIM54Q9BYV2 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.33■□□□□ 0.36
TRIM54Q9BYV2 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms