Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 BICD1-207ENST00000551848 1962 ntBASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 BX276092.7-203ENST00000637198 1536 ntBASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 FGFR3P6-201ENST00000457012 610 ntBASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 SLC25A6P4-201ENST00000586535 553 ntBASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 AC138028.4-201ENST00000564984 1845 ntBASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 AC009949.1-201ENST00000623048 1830 ntBASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP3Q9BWW4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 KRT18P67-201ENST00000432816 1264 ntBASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 AL773604.1-201ENST00000617417 272 ntBASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 AL139288.1-201ENST00000623748 933 ntBASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 KRT18P55-202ENST00000578578 1546 ntBASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms