Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 CTNS-203ENST00000399306 803 ntTSL 3 BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 THAP5-204ENST00000438865 868 ntTSL 2 BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK3BQ9BT76 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 AC068880.1-201ENST00000507289 2297 ntBASIC12.23□□□□□ -0.45
UPK3BQ9BT76 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 CD9-202ENST00000382515 1229 ntTSL 5 BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 AC026396.1-201ENST00000419388 421 ntBASIC12.23□□□□□ -0.45
UPK3BQ9BT76 AC096633.1-201ENST00000422446 749 ntBASIC12.23□□□□□ -0.45
UPK3BQ9BT76 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 GZMM-202ENST00000592501 941 ntTSL 3 BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 AC135050.7-201ENST00000624508 2218 ntBASIC12.23□□□□□ -0.45
UPK3BQ9BT76 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
UPK3BQ9BT76 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms