Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCGF1Q9BSM1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.76□□□□□ -0.05
PCGF1Q9BSM1 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCGF1Q9BSM1 AC068472.1-201ENST00000474589 881 ntBASIC14.76□□□□□ -0.05
PCGF1Q9BSM1 UNC93B7-201ENST00000509439 705 ntBASIC14.76□□□□□ -0.05
PCGF1Q9BSM1 AC096582.2-201ENST00000510860 516 ntBASIC14.76□□□□□ -0.05
PCGF1Q9BSM1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC14.76□□□□□ -0.05
PCGF1Q9BSM1 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.76□□□□□ -0.05
PCGF1Q9BSM1 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.76□□□□□ -0.05
PCGF1Q9BSM1 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.76□□□□□ -0.05
PCGF1Q9BSM1 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCGF1Q9BSM1 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCGF1Q9BSM1 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.76□□□□□ -0.05
PCGF1Q9BSM1 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCGF1Q9BSM1 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC14.76□□□□□ -0.05
PCGF1Q9BSM1 AC008764.6-201ENST00000595909 2069 ntBASIC14.76□□□□□ -0.05
PCGF1Q9BSM1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
PCGF1Q9BSM1 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCGF1Q9BSM1 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.76□□□□□ -0.05
PCGF1Q9BSM1 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCGF1Q9BSM1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCGF1Q9BSM1 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCGF1Q9BSM1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCGF1Q9BSM1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCGF1Q9BSM1 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCGF1Q9BSM1 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.76□□□□□ -0.05
PCGF1Q9BSM1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCGF1Q9BSM1 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 REXO1L9P-201ENST00000604264 2108 ntBASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 AC008894.3-201ENST00000624324 3103 ntBASIC14.75□□□□□ -0.05
PCGF1Q9BSM1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 LINC00896-202ENST00000609602 2128 ntBASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms