Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VRK1Q99986 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VRK1Q99986 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
VRK1Q99986 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.56■□□□□ 0.08
VRK1Q99986 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
VRK1Q99986 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
VRK1Q99986 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
VRK1Q99986 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK1Q99986 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK1Q99986 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
VRK1Q99986 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
VRK1Q99986 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.55■□□□□ 0.08
VRK1Q99986 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK1Q99986 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
VRK1Q99986 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VRK1Q99986 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VRK1Q99986 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK1Q99986 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.55■□□□□ 0.08
VRK1Q99986 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.55■□□□□ 0.08
VRK1Q99986 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VRK1Q99986 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK1Q99986 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK1Q99986 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VRK1Q99986 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.55■□□□□ 0.08
VRK1Q99986 AL353692.3-201ENST00000407031 1396 ntBASIC15.55■□□□□ 0.08
VRK1Q99986 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK1Q99986 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK1Q99986 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VRK1Q99986 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK1Q99986 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK1Q99986 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
VRK1Q99986 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.55■□□□□ 0.08
VRK1Q99986 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.55■□□□□ 0.08
VRK1Q99986 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
VRK1Q99986 DRAXINP1-201ENST00000437611 948 ntBASIC15.55■□□□□ 0.08
VRK1Q99986 AC104819.1-201ENST00000504587 486 ntBASIC15.55■□□□□ 0.08
VRK1Q99986 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.55■□□□□ 0.08
VRK1Q99986 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.55■□□□□ 0.08
VRK1Q99986 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK1Q99986 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK1Q99986 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK1Q99986 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.55■□□□□ 0.08
VRK1Q99986 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
VRK1Q99986 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VRK1Q99986 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK1Q99986 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK1Q99986 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK1Q99986 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
VRK1Q99986 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.55■□□□□ 0.08
VRK1Q99986 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VRK1Q99986 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VRK1Q99986 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VRK1Q99986 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK1Q99986 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VRK1Q99986 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.55■□□□□ 0.08
VRK1Q99986 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK1Q99986 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
VRK1Q99986 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VRK1Q99986 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
VRK1Q99986 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
VRK1Q99986 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VRK1Q99986 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VRK1Q99986 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.54■□□□□ 0.08
VRK1Q99986 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
VRK1Q99986 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.54■□□□□ 0.08
VRK1Q99986 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
VRK1Q99986 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VRK1Q99986 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.54■□□□□ 0.08
VRK1Q99986 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VRK1Q99986 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
VRK1Q99986 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.54■□□□□ 0.08
VRK1Q99986 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
VRK1Q99986 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VRK1Q99986 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.54■□□□□ 0.08
VRK1Q99986 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.54■□□□□ 0.08
VRK1Q99986 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.54■□□□□ 0.08
VRK1Q99986 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.54■□□□□ 0.08
VRK1Q99986 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
VRK1Q99986 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
VRK1Q99986 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
VRK1Q99986 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VRK1Q99986 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VRK1Q99986 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VRK1Q99986 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
VRK1Q99986 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.54■□□□□ 0.08
VRK1Q99986 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.54■□□□□ 0.08
VRK1Q99986 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VRK1Q99986 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.53■□□□□ 0.08
VRK1Q99986 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.53■□□□□ 0.08
VRK1Q99986 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.53■□□□□ 0.08
VRK1Q99986 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VRK1Q99986 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VRK1Q99986 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VRK1Q99986 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.53■□□□□ 0.08
VRK1Q99986 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
VRK1Q99986 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VRK1Q99986 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VRK1Q99986 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
VRK1Q99986 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.53■□□□□ 0.08
VRK1Q99986 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms