Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
CDCA3Q99618 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
CDCA3Q99618 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDCA3Q99618 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.13■□□□□ 0.49
CDCA3Q99618 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CDCA3Q99618 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDCA3Q99618 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDCA3Q99618 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDCA3Q99618 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDCA3Q99618 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDCA3Q99618 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.12■□□□□ 0.49
CDCA3Q99618 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDCA3Q99618 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDCA3Q99618 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDCA3Q99618 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.12■□□□□ 0.49
CDCA3Q99618 AC015922.1-201ENST00000421102 1152 ntBASIC18.12■□□□□ 0.49
CDCA3Q99618 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDCA3Q99618 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CDCA3Q99618 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.12■□□□□ 0.49
CDCA3Q99618 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.12■□□□□ 0.49
CDCA3Q99618 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.12■□□□□ 0.49
CDCA3Q99618 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDCA3Q99618 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.12■□□□□ 0.49
CDCA3Q99618 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDCA3Q99618 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDCA3Q99618 TUBB3P1-201ENST00000405796 1332 ntBASIC18.12■□□□□ 0.49
CDCA3Q99618 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
CDCA3Q99618 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.12■□□□□ 0.49
CDCA3Q99618 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDCA3Q99618 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDCA3Q99618 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CDCA3Q99618 AC046185.3-201ENST00000623228 1824 ntBASIC18.12■□□□□ 0.49
CDCA3Q99618 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.11■□□□□ 0.49
CDCA3Q99618 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDCA3Q99618 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CDCA3Q99618 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDCA3Q99618 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDCA3Q99618 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDCA3Q99618 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDCA3Q99618 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDCA3Q99618 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDCA3Q99618 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.11■□□□□ 0.49
CDCA3Q99618 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.11■□□□□ 0.49
CDCA3Q99618 KLF2P3-201ENST00000451977 1087 ntBASIC18.11■□□□□ 0.49
CDCA3Q99618 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.11■□□□□ 0.49
CDCA3Q99618 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDCA3Q99618 RARRES2P8-201ENST00000566335 367 ntBASIC18.11■□□□□ 0.49
CDCA3Q99618 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.11■□□□□ 0.49
CDCA3Q99618 AL161645.1-201ENST00000622716 1255 ntBASIC18.11■□□□□ 0.49
CDCA3Q99618 AL035252.4-201ENST00000624174 288 ntBASIC18.11■□□□□ 0.49
CDCA3Q99618 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDCA3Q99618 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
CDCA3Q99618 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDCA3Q99618 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.11■□□□□ 0.49
CDCA3Q99618 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.11■□□□□ 0.49
CDCA3Q99618 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDCA3Q99618 AL135999.2-201ENST00000622438 1686 ntBASIC18.11■□□□□ 0.49
CDCA3Q99618 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CDCA3Q99618 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CDCA3Q99618 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDCA3Q99618 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDCA3Q99618 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDCA3Q99618 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDCA3Q99618 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDCA3Q99618 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDCA3Q99618 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDCA3Q99618 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.11■□□□□ 0.49
CDCA3Q99618 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDCA3Q99618 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDCA3Q99618 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CDCA3Q99618 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDCA3Q99618 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CDCA3Q99618 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDCA3Q99618 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDCA3Q99618 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDCA3Q99618 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDCA3Q99618 MIR943-201ENST00000401286 94 ntBASIC18.1■□□□□ 0.49
CDCA3Q99618 AC005034.1-201ENST00000426657 489 ntBASIC18.1■□□□□ 0.49
CDCA3Q99618 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.1■□□□□ 0.49
CDCA3Q99618 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.1■□□□□ 0.49
CDCA3Q99618 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.1■□□□□ 0.49
CDCA3Q99618 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.1■□□□□ 0.49
CDCA3Q99618 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDCA3Q99618 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.1■□□□□ 0.49
CDCA3Q99618 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.1■□□□□ 0.49
CDCA3Q99618 AC243562.1-201ENST00000560672 389 ntBASIC18.1■□□□□ 0.49
CDCA3Q99618 AL135744.1-201ENST00000565098 629 ntBASIC18.1■□□□□ 0.49
CDCA3Q99618 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.1■□□□□ 0.49
CDCA3Q99618 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.1■□□□□ 0.49
CDCA3Q99618 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
CDCA3Q99618 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDCA3Q99618 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDCA3Q99618 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.09■□□□□ 0.49
CDCA3Q99618 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDCA3Q99618 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDCA3Q99618 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CDCA3Q99618 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.09■□□□□ 0.49
CDCA3Q99618 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
CDCA3Q99618 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.09■□□□□ 0.49
CDCA3Q99618 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms