Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC3BQ96PB8 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC3BQ96PB8 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC3BQ96PB8 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC3BQ96PB8 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC3BQ96PB8 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC3BQ96PB8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC3BQ96PB8 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.84■□□□□ 0.45
LRRC3BQ96PB8 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
LRRC3BQ96PB8 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
LRRC3BQ96PB8 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.83■□□□□ 0.45
LRRC3BQ96PB8 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.83■□□□□ 0.45
LRRC3BQ96PB8 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRRC3BQ96PB8 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.83■□□□□ 0.45
LRRC3BQ96PB8 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.83■□□□□ 0.45
LRRC3BQ96PB8 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.83■□□□□ 0.45
LRRC3BQ96PB8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
LRRC3BQ96PB8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.83■□□□□ 0.44
LRRC3BQ96PB8 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC3BQ96PB8 AL139400.1-201ENST00000366220 510 ntBASIC17.83■□□□□ 0.44
LRRC3BQ96PB8 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC3BQ96PB8 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC3BQ96PB8 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.83■□□□□ 0.44
LRRC3BQ96PB8 PAWRP1-201ENST00000451083 565 ntBASIC17.83■□□□□ 0.44
LRRC3BQ96PB8 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.83■□□□□ 0.44
LRRC3BQ96PB8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.83■□□□□ 0.44
LRRC3BQ96PB8 AC007064.4-201ENST00000637740 555 ntBASIC17.83■□□□□ 0.44
LRRC3BQ96PB8 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC3BQ96PB8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC3BQ96PB8 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC3BQ96PB8 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC3BQ96PB8 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.83■□□□□ 0.44
LRRC3BQ96PB8 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC3BQ96PB8 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC3BQ96PB8 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC3BQ96PB8 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC3BQ96PB8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC3BQ96PB8 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC3BQ96PB8 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC3BQ96PB8 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC3BQ96PB8 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
LRRC3BQ96PB8 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
LRRC3BQ96PB8 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.82■□□□□ 0.44
LRRC3BQ96PB8 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC3BQ96PB8 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.82■□□□□ 0.44
LRRC3BQ96PB8 AL645939.2-201ENST00000427340 991 ntBASIC17.82■□□□□ 0.44
LRRC3BQ96PB8 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.82■□□□□ 0.44
LRRC3BQ96PB8 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC3BQ96PB8 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
LRRC3BQ96PB8 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC3BQ96PB8 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.82■□□□□ 0.44
LRRC3BQ96PB8 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.82■□□□□ 0.44
LRRC3BQ96PB8 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.82■□□□□ 0.44
LRRC3BQ96PB8 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.82■□□□□ 0.44
LRRC3BQ96PB8 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
LRRC3BQ96PB8 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.82■□□□□ 0.44
LRRC3BQ96PB8 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.82■□□□□ 0.44
LRRC3BQ96PB8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC3BQ96PB8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC3BQ96PB8 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC3BQ96PB8 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC3BQ96PB8 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.82■□□□□ 0.44
LRRC3BQ96PB8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.82■□□□□ 0.44
LRRC3BQ96PB8 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC3BQ96PB8 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC3BQ96PB8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC3BQ96PB8 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.81■□□□□ 0.44
LRRC3BQ96PB8 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
LRRC3BQ96PB8 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC3BQ96PB8 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC3BQ96PB8 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.81■□□□□ 0.44
LRRC3BQ96PB8 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC3BQ96PB8 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.81■□□□□ 0.44
LRRC3BQ96PB8 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC3BQ96PB8 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.81■□□□□ 0.44
LRRC3BQ96PB8 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.81■□□□□ 0.44
LRRC3BQ96PB8 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
LRRC3BQ96PB8 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.81■□□□□ 0.44
LRRC3BQ96PB8 SLC25A6P2-201ENST00000497974 877 ntBASIC17.81■□□□□ 0.44
LRRC3BQ96PB8 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC3BQ96PB8 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.81■□□□□ 0.44
LRRC3BQ96PB8 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.81■□□□□ 0.44
LRRC3BQ96PB8 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.81■□□□□ 0.44
LRRC3BQ96PB8 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.81■□□□□ 0.44
LRRC3BQ96PB8 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
LRRC3BQ96PB8 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
LRRC3BQ96PB8 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC3BQ96PB8 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC3BQ96PB8 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC3BQ96PB8 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC3BQ96PB8 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
LRRC3BQ96PB8 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC3BQ96PB8 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC3BQ96PB8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC3BQ96PB8 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
LRRC3BQ96PB8 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC3BQ96PB8 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.81■□□□□ 0.44
LRRC3BQ96PB8 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC3BQ96PB8 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC3BQ96PB8 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms