Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NECTIN4Q96NY8 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NECTIN4Q96NY8 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NECTIN4Q96NY8 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NECTIN4Q96NY8 AC006116.8-202ENST00000587620 1550 ntBASIC18.08■□□□□ 0.48
NECTIN4Q96NY8 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NECTIN4Q96NY8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.08■□□□□ 0.48
NECTIN4Q96NY8 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.08■□□□□ 0.48
NECTIN4Q96NY8 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.08■□□□□ 0.48
NECTIN4Q96NY8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NECTIN4Q96NY8 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.07■□□□□ 0.48
NECTIN4Q96NY8 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NECTIN4Q96NY8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.07■□□□□ 0.48
NECTIN4Q96NY8 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NECTIN4Q96NY8 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NECTIN4Q96NY8 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NECTIN4Q96NY8 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NECTIN4Q96NY8 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
NECTIN4Q96NY8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NECTIN4Q96NY8 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.07■□□□□ 0.48
NECTIN4Q96NY8 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.07■□□□□ 0.48
NECTIN4Q96NY8 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.07■□□□□ 0.48
NECTIN4Q96NY8 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.07■□□□□ 0.48
NECTIN4Q96NY8 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.07■□□□□ 0.48
NECTIN4Q96NY8 ADH5P3-201ENST00000433842 1137 ntBASIC18.07■□□□□ 0.48
NECTIN4Q96NY8 CNN2P2-201ENST00000443536 909 ntBASIC18.07■□□□□ 0.48
NECTIN4Q96NY8 CNN2P3-201ENST00000450201 906 ntBASIC18.07■□□□□ 0.48
NECTIN4Q96NY8 TIMM8BP1-201ENST00000452384 211 ntBASIC18.07■□□□□ 0.48
NECTIN4Q96NY8 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.07■□□□□ 0.48
NECTIN4Q96NY8 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.07■□□□□ 0.48
NECTIN4Q96NY8 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.07■□□□□ 0.48
NECTIN4Q96NY8 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.07■□□□□ 0.48
NECTIN4Q96NY8 AC026120.1-201ENST00000611536 926 ntBASIC18.07■□□□□ 0.48
NECTIN4Q96NY8 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.07■□□□□ 0.48
NECTIN4Q96NY8 AL136317.3-201ENST00000618497 906 ntBASIC18.07■□□□□ 0.48
NECTIN4Q96NY8 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NECTIN4Q96NY8 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.07■□□□□ 0.48
NECTIN4Q96NY8 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
NECTIN4Q96NY8 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
NECTIN4Q96NY8 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.07■□□□□ 0.48
NECTIN4Q96NY8 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NECTIN4Q96NY8 LETM1P2-201ENST00000597330 2178 ntBASIC18.07■□□□□ 0.48
NECTIN4Q96NY8 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.07■□□□□ 0.48
NECTIN4Q96NY8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NECTIN4Q96NY8 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.07■□□□□ 0.48
NECTIN4Q96NY8 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.06■□□□□ 0.48
NECTIN4Q96NY8 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NECTIN4Q96NY8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NECTIN4Q96NY8 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NECTIN4Q96NY8 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.06■□□□□ 0.48
NECTIN4Q96NY8 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NECTIN4Q96NY8 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NECTIN4Q96NY8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NECTIN4Q96NY8 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NECTIN4Q96NY8 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NECTIN4Q96NY8 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.06■□□□□ 0.48
NECTIN4Q96NY8 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.06■□□□□ 0.48
NECTIN4Q96NY8 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NECTIN4Q96NY8 INGX-202ENST00000489074 768 ntBASIC18.06■□□□□ 0.48
NECTIN4Q96NY8 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NECTIN4Q96NY8 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.06■□□□□ 0.48
NECTIN4Q96NY8 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.06■□□□□ 0.48
NECTIN4Q96NY8 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NECTIN4Q96NY8 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NECTIN4Q96NY8 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.06■□□□□ 0.48
NECTIN4Q96NY8 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NECTIN4Q96NY8 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NECTIN4Q96NY8 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
NECTIN4Q96NY8 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NECTIN4Q96NY8 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
NECTIN4Q96NY8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NECTIN4Q96NY8 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NECTIN4Q96NY8 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NECTIN4Q96NY8 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
NECTIN4Q96NY8 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NECTIN4Q96NY8 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
NECTIN4Q96NY8 AL590787.1-201ENST00000568856 1315 ntBASIC18.05■□□□□ 0.48
NECTIN4Q96NY8 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NECTIN4Q96NY8 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NECTIN4Q96NY8 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NECTIN4Q96NY8 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NECTIN4Q96NY8 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.05■□□□□ 0.48
NECTIN4Q96NY8 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.05■□□□□ 0.48
NECTIN4Q96NY8 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.05■□□□□ 0.48
NECTIN4Q96NY8 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
NECTIN4Q96NY8 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NECTIN4Q96NY8 AC093214.1-201ENST00000511688 1107 ntBASIC18.05■□□□□ 0.48
NECTIN4Q96NY8 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.05■□□□□ 0.48
NECTIN4Q96NY8 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NECTIN4Q96NY8 AC093520.2-201ENST00000561830 333 ntBASIC18.05■□□□□ 0.48
NECTIN4Q96NY8 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.05■□□□□ 0.48
NECTIN4Q96NY8 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.05■□□□□ 0.48
NECTIN4Q96NY8 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
NECTIN4Q96NY8 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
NECTIN4Q96NY8 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
NECTIN4Q96NY8 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NECTIN4Q96NY8 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.05■□□□□ 0.48
NECTIN4Q96NY8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.05■□□□□ 0.48
NECTIN4Q96NY8 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NECTIN4Q96NY8 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms