Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRICKLE1Q96MT3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.12■□□□□ 0.49
PRICKLE1Q96MT3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRICKLE1Q96MT3 TNRC18P3-201ENST00000441896 2691 ntBASIC18.12■□□□□ 0.49
PRICKLE1Q96MT3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.12■□□□□ 0.49
PRICKLE1Q96MT3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
PRICKLE1Q96MT3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRICKLE1Q96MT3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRICKLE1Q96MT3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PRICKLE1Q96MT3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.12■□□□□ 0.49
PRICKLE1Q96MT3 SPDYE21P-201ENST00000413323 827 ntBASIC18.12■□□□□ 0.49
PRICKLE1Q96MT3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRICKLE1Q96MT3 SCARNA2-201ENST00000458748 420 ntBASIC18.12■□□□□ 0.49
PRICKLE1Q96MT3 BX005266.1-201ENST00000473402 457 ntBASIC18.12■□□□□ 0.49
PRICKLE1Q96MT3 RNPS1P1-201ENST00000507437 918 ntBASIC18.12■□□□□ 0.49
PRICKLE1Q96MT3 AL662844.1-201ENST00000546340 181 ntBASIC18.12■□□□□ 0.49
PRICKLE1Q96MT3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.12■□□□□ 0.49
PRICKLE1Q96MT3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.12■□□□□ 0.49
PRICKLE1Q96MT3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.12■□□□□ 0.49
PRICKLE1Q96MT3 AC109462.3-201ENST00000573934 613 ntBASIC18.12■□□□□ 0.49
PRICKLE1Q96MT3 NKAPP1-205ENST00000585790 367 ntBASIC18.12■□□□□ 0.49
PRICKLE1Q96MT3 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRICKLE1Q96MT3 AC025062.2-201ENST00000605477 670 ntBASIC18.12■□□□□ 0.49
PRICKLE1Q96MT3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRICKLE1Q96MT3 MIR7706-201ENST00000613747 67 ntBASIC18.12■□□□□ 0.49
PRICKLE1Q96MT3 AL773604.1-201ENST00000617417 272 ntBASIC18.12■□□□□ 0.49
PRICKLE1Q96MT3 AC073592.4-201ENST00000623827 446 ntBASIC18.12■□□□□ 0.49
PRICKLE1Q96MT3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
PRICKLE1Q96MT3 AC006116.8-202ENST00000587620 1550 ntBASIC18.12■□□□□ 0.49
PRICKLE1Q96MT3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.12■□□□□ 0.49
PRICKLE1Q96MT3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRICKLE1Q96MT3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRICKLE1Q96MT3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRICKLE1Q96MT3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRICKLE1Q96MT3 HCG11-201ENST00000411553 5696 ntBASIC18.12■□□□□ 0.49
PRICKLE1Q96MT3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
PRICKLE1Q96MT3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRICKLE1Q96MT3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRICKLE1Q96MT3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRICKLE1Q96MT3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRICKLE1Q96MT3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRICKLE1Q96MT3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRICKLE1Q96MT3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRICKLE1Q96MT3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRICKLE1Q96MT3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.11■□□□□ 0.49
PRICKLE1Q96MT3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.11■□□□□ 0.49
PRICKLE1Q96MT3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PRICKLE1Q96MT3 HNRNPDP1-201ENST00000439535 754 ntBASIC18.11■□□□□ 0.49
PRICKLE1Q96MT3 AF186996.4-201ENST00000467186 377 ntBASIC18.11■□□□□ 0.49
PRICKLE1Q96MT3 AC073648.2-201ENST00000510116 352 ntBASIC18.11■□□□□ 0.49
PRICKLE1Q96MT3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRICKLE1Q96MT3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.11■□□□□ 0.49
PRICKLE1Q96MT3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.11■□□□□ 0.49
PRICKLE1Q96MT3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.11■□□□□ 0.49
PRICKLE1Q96MT3 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.11■□□□□ 0.49
PRICKLE1Q96MT3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
PRICKLE1Q96MT3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.11■□□□□ 0.49
PRICKLE1Q96MT3 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.11■□□□□ 0.49
PRICKLE1Q96MT3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRICKLE1Q96MT3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRICKLE1Q96MT3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRICKLE1Q96MT3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRICKLE1Q96MT3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRICKLE1Q96MT3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.11■□□□□ 0.49
PRICKLE1Q96MT3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.11■□□□□ 0.49
PRICKLE1Q96MT3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRICKLE1Q96MT3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRICKLE1Q96MT3 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRICKLE1Q96MT3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRICKLE1Q96MT3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
PRICKLE1Q96MT3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRICKLE1Q96MT3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PRICKLE1Q96MT3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
PRICKLE1Q96MT3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRICKLE1Q96MT3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PRICKLE1Q96MT3 AC004817.3-201ENST00000602957 2129 ntBASIC18.1■□□□□ 0.49
PRICKLE1Q96MT3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.1■□□□□ 0.49
PRICKLE1Q96MT3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PRICKLE1Q96MT3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRICKLE1Q96MT3 AC148477.5-201ENST00000625164 1645 ntBASIC18.1■□□□□ 0.49
PRICKLE1Q96MT3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRICKLE1Q96MT3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.1■□□□□ 0.49
PRICKLE1Q96MT3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRICKLE1Q96MT3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
PRICKLE1Q96MT3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRICKLE1Q96MT3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PRICKLE1Q96MT3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRICKLE1Q96MT3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRICKLE1Q96MT3 AC005104.2-201ENST00000427818 678 ntBASIC18.1■□□□□ 0.49
PRICKLE1Q96MT3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.1■□□□□ 0.49
PRICKLE1Q96MT3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.1■□□□□ 0.49
PRICKLE1Q96MT3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
PRICKLE1Q96MT3 AL049840.3-201ENST00000602669 611 ntBASIC18.1■□□□□ 0.49
PRICKLE1Q96MT3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRICKLE1Q96MT3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRICKLE1Q96MT3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRICKLE1Q96MT3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PRICKLE1Q96MT3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRICKLE1Q96MT3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRICKLE1Q96MT3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms