Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
CALR3Q96L12 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CALR3Q96L12 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CALR3Q96L12 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.59■□□□□ 0.57
CALR3Q96L12 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CALR3Q96L12 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.59■□□□□ 0.57
CALR3Q96L12 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CALR3Q96L12 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CALR3Q96L12 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CALR3Q96L12 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CALR3Q96L12 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CALR3Q96L12 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CALR3Q96L12 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CALR3Q96L12 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CALR3Q96L12 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CALR3Q96L12 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CALR3Q96L12 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CALR3Q96L12 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
CALR3Q96L12 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CALR3Q96L12 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CALR3Q96L12 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CALR3Q96L12 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CALR3Q96L12 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CALR3Q96L12 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CALR3Q96L12 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.58■□□□□ 0.56
CALR3Q96L12 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CALR3Q96L12 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.58■□□□□ 0.56
CALR3Q96L12 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.58■□□□□ 0.56
CALR3Q96L12 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.58■□□□□ 0.56
CALR3Q96L12 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.58■□□□□ 0.56
CALR3Q96L12 AL441883.1-201ENST00000566170 1045 ntBASIC18.58■□□□□ 0.56
CALR3Q96L12 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.58■□□□□ 0.56
CALR3Q96L12 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
CALR3Q96L12 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CALR3Q96L12 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CALR3Q96L12 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CALR3Q96L12 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CALR3Q96L12 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.58■□□□□ 0.56
CALR3Q96L12 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.58■□□□□ 0.56
CALR3Q96L12 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CALR3Q96L12 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.58■□□□□ 0.56
CALR3Q96L12 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.58■□□□□ 0.56
CALR3Q96L12 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CALR3Q96L12 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
CALR3Q96L12 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CALR3Q96L12 AL596257.1-201ENST00000641463 2694 ntBASIC18.57■□□□□ 0.56
CALR3Q96L12 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.57■□□□□ 0.56
CALR3Q96L12 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CALR3Q96L12 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CALR3Q96L12 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CALR3Q96L12 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.57■□□□□ 0.56
CALR3Q96L12 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CALR3Q96L12 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CALR3Q96L12 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CALR3Q96L12 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.57■□□□□ 0.56
CALR3Q96L12 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CALR3Q96L12 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CALR3Q96L12 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CALR3Q96L12 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CALR3Q96L12 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.57■□□□□ 0.56
CALR3Q96L12 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.57■□□□□ 0.56
CALR3Q96L12 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CALR3Q96L12 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.57■□□□□ 0.56
CALR3Q96L12 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CALR3Q96L12 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CALR3Q96L12 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CALR3Q96L12 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CALR3Q96L12 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CALR3Q96L12 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CALR3Q96L12 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.57■□□□□ 0.56
CALR3Q96L12 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.57■□□□□ 0.56
CALR3Q96L12 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.57■□□□□ 0.56
CALR3Q96L12 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CALR3Q96L12 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CALR3Q96L12 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CALR3Q96L12 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CALR3Q96L12 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CALR3Q96L12 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.56■□□□□ 0.56
CALR3Q96L12 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CALR3Q96L12 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CALR3Q96L12 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CALR3Q96L12 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.56■□□□□ 0.56
CALR3Q96L12 AC106886.4-201ENST00000623557 2502 ntBASIC18.56■□□□□ 0.56
CALR3Q96L12 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CALR3Q96L12 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CALR3Q96L12 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CALR3Q96L12 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CALR3Q96L12 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CALR3Q96L12 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.56■□□□□ 0.56
CALR3Q96L12 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CALR3Q96L12 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CALR3Q96L12 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.56■□□□□ 0.56
CALR3Q96L12 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.56■□□□□ 0.56
CALR3Q96L12 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.56■□□□□ 0.56
CALR3Q96L12 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.56■□□□□ 0.56
CALR3Q96L12 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
CALR3Q96L12 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CALR3Q96L12 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CALR3Q96L12 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CALR3Q96L12 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms