Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
CDK5RAP3Q96JB5 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.82■□□□□ 0.76
CDK5RAP3Q96JB5 LETM1P2-201ENST00000597330 2178 ntBASIC19.82■□□□□ 0.76
CDK5RAP3Q96JB5 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5RAP3Q96JB5 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5RAP3Q96JB5 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5RAP3Q96JB5 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CDK5RAP3Q96JB5 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5RAP3Q96JB5 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5RAP3Q96JB5 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5RAP3Q96JB5 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CDK5RAP3Q96JB5 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5RAP3Q96JB5 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5RAP3Q96JB5 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5RAP3Q96JB5 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5RAP3Q96JB5 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5RAP3Q96JB5 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5RAP3Q96JB5 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.81■□□□□ 0.76
CDK5RAP3Q96JB5 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CDK5RAP3Q96JB5 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.81■□□□□ 0.76
CDK5RAP3Q96JB5 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5RAP3Q96JB5 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.81■□□□□ 0.76
CDK5RAP3Q96JB5 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5RAP3Q96JB5 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.81■□□□□ 0.76
CDK5RAP3Q96JB5 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.81■□□□□ 0.76
CDK5RAP3Q96JB5 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.81■□□□□ 0.76
CDK5RAP3Q96JB5 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5RAP3Q96JB5 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.81■□□□□ 0.76
CDK5RAP3Q96JB5 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.81■□□□□ 0.76
CDK5RAP3Q96JB5 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.81■□□□□ 0.76
CDK5RAP3Q96JB5 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5RAP3Q96JB5 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.81■□□□□ 0.76
CDK5RAP3Q96JB5 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.81■□□□□ 0.76
CDK5RAP3Q96JB5 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5RAP3Q96JB5 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5RAP3Q96JB5 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5RAP3Q96JB5 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CDK5RAP3Q96JB5 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CDK5RAP3Q96JB5 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.81■□□□□ 0.76
CDK5RAP3Q96JB5 NSUN5P1-202ENST00000421140 1535 ntBASIC19.81■□□□□ 0.76
CDK5RAP3Q96JB5 NSUN5P2-203ENST00000457352 1529 ntBASIC19.81■□□□□ 0.76
CDK5RAP3Q96JB5 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5RAP3Q96JB5 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CDK5RAP3Q96JB5 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.81■□□□□ 0.76
CDK5RAP3Q96JB5 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CDK5RAP3Q96JB5 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5RAP3Q96JB5 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5RAP3Q96JB5 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.8■□□□□ 0.76
CDK5RAP3Q96JB5 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.8■□□□□ 0.76
CDK5RAP3Q96JB5 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5RAP3Q96JB5 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5RAP3Q96JB5 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5RAP3Q96JB5 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.8■□□□□ 0.76
CDK5RAP3Q96JB5 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5RAP3Q96JB5 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5RAP3Q96JB5 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5RAP3Q96JB5 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5RAP3Q96JB5 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5RAP3Q96JB5 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.8■□□□□ 0.76
CDK5RAP3Q96JB5 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.8■□□□□ 0.76
CDK5RAP3Q96JB5 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.8■□□□□ 0.76
CDK5RAP3Q96JB5 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.8■□□□□ 0.76
CDK5RAP3Q96JB5 AC096582.2-201ENST00000510860 516 ntBASIC19.8■□□□□ 0.76
CDK5RAP3Q96JB5 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.8■□□□□ 0.76
CDK5RAP3Q96JB5 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.8■□□□□ 0.76
CDK5RAP3Q96JB5 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5RAP3Q96JB5 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CDK5RAP3Q96JB5 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CDK5RAP3Q96JB5 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5RAP3Q96JB5 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.8■□□□□ 0.76
CDK5RAP3Q96JB5 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.8■□□□□ 0.76
CDK5RAP3Q96JB5 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CDK5RAP3Q96JB5 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CDK5RAP3Q96JB5 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5RAP3Q96JB5 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5RAP3Q96JB5 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CDK5RAP3Q96JB5 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.8■□□□□ 0.76
CDK5RAP3Q96JB5 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CDK5RAP3Q96JB5 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.79■□□□□ 0.76
CDK5RAP3Q96JB5 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
CDK5RAP3Q96JB5 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.79■□□□□ 0.76
CDK5RAP3Q96JB5 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CDK5RAP3Q96JB5 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDK5RAP3Q96JB5 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDK5RAP3Q96JB5 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDK5RAP3Q96JB5 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDK5RAP3Q96JB5 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
CDK5RAP3Q96JB5 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDK5RAP3Q96JB5 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDK5RAP3Q96JB5 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.79■□□□□ 0.76
CDK5RAP3Q96JB5 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDK5RAP3Q96JB5 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDK5RAP3Q96JB5 AC005104.2-201ENST00000427818 678 ntBASIC19.79■□□□□ 0.76
CDK5RAP3Q96JB5 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDK5RAP3Q96JB5 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.79■□□□□ 0.76
CDK5RAP3Q96JB5 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.79■□□□□ 0.76
CDK5RAP3Q96JB5 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.79■□□□□ 0.76
CDK5RAP3Q96JB5 AC012615.1-201ENST00000565797 1299 ntBASIC19.79■□□□□ 0.76
CDK5RAP3Q96JB5 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CDK5RAP3Q96JB5 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms