Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF25Q96BH1 Z97985.1-201ENST00000332270 946 ntBASIC18.51■□□□□ 0.55
RNF25Q96BH1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF25Q96BH1 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
RNF25Q96BH1 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
RNF25Q96BH1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.51■□□□□ 0.55
RNF25Q96BH1 ITGB5-AS1-201ENST00000495917 460 ntTSL 3 BASIC18.51■□□□□ 0.55
RNF25Q96BH1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.51■□□□□ 0.55
RNF25Q96BH1 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF25Q96BH1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF25Q96BH1 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.51■□□□□ 0.55
RNF25Q96BH1 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF25Q96BH1 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF25Q96BH1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.51■□□□□ 0.55
RNF25Q96BH1 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.51■□□□□ 0.55
RNF25Q96BH1 LINC01023-201ENST00000606054 436 ntBASIC18.51■□□□□ 0.55
RNF25Q96BH1 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.51■□□□□ 0.55
RNF25Q96BH1 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF25Q96BH1 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF25Q96BH1 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF25Q96BH1 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF25Q96BH1 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF25Q96BH1 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
RNF25Q96BH1 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF25Q96BH1 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF25Q96BH1 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF25Q96BH1 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF25Q96BH1 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF25Q96BH1 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF25Q96BH1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF25Q96BH1 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF25Q96BH1 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF25Q96BH1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF25Q96BH1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
RNF25Q96BH1 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC18.5■□□□□ 0.55
RNF25Q96BH1 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.5■□□□□ 0.55
RNF25Q96BH1 AC005332.3-201ENST00000589904 676 ntBASIC18.5■□□□□ 0.55
RNF25Q96BH1 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF25Q96BH1 GPR32P1-201ENST00000601788 811 ntBASIC18.5■□□□□ 0.55
RNF25Q96BH1 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.5■□□□□ 0.55
RNF25Q96BH1 LINC01451-201ENST00000623792 534 ntBASIC18.5■□□□□ 0.55
RNF25Q96BH1 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
RNF25Q96BH1 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF25Q96BH1 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
RNF25Q96BH1 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF25Q96BH1 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF25Q96BH1 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF25Q96BH1 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF25Q96BH1 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RNF25Q96BH1 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF25Q96BH1 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF25Q96BH1 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF25Q96BH1 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
RNF25Q96BH1 LINC01311-201ENST00000565162 1445 ntBASIC18.49■□□□□ 0.55
RNF25Q96BH1 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF25Q96BH1 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF25Q96BH1 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.49■□□□□ 0.55
RNF25Q96BH1 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF25Q96BH1 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF25Q96BH1 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF25Q96BH1 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF25Q96BH1 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF25Q96BH1 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF25Q96BH1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF25Q96BH1 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF25Q96BH1 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF25Q96BH1 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF25Q96BH1 AL603841.1-201ENST00000430516 664 ntBASIC18.49■□□□□ 0.55
RNF25Q96BH1 AC092647.4-201ENST00000457211 535 ntBASIC18.49■□□□□ 0.55
RNF25Q96BH1 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC18.49■□□□□ 0.55
RNF25Q96BH1 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.49■□□□□ 0.55
RNF25Q96BH1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF25Q96BH1 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.49■□□□□ 0.55
RNF25Q96BH1 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF25Q96BH1 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF25Q96BH1 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF25Q96BH1 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF25Q96BH1 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
RNF25Q96BH1 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF25Q96BH1 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF25Q96BH1 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF25Q96BH1 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF25Q96BH1 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF25Q96BH1 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.49■□□□□ 0.55
RNF25Q96BH1 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RNF25Q96BH1 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF25Q96BH1 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF25Q96BH1 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF25Q96BH1 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF25Q96BH1 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF25Q96BH1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.49■□□□□ 0.55
RNF25Q96BH1 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.48■□□□□ 0.55
RNF25Q96BH1 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
RNF25Q96BH1 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF25Q96BH1 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.48■□□□□ 0.55
RNF25Q96BH1 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF25Q96BH1 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RNF25Q96BH1 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RNF25Q96BH1 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF25Q96BH1 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms