Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.42■□□□□ 0.38
SCAMP4Q969E2 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCAMP4Q969E2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCAMP4Q969E2 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
SCAMP4Q969E2 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCAMP4Q969E2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
SCAMP4Q969E2 GNAS-203ENST00000306120 1878 ntBASIC17.42■□□□□ 0.38
SCAMP4Q969E2 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.42■□□□□ 0.38
SCAMP4Q969E2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SCAMP4Q969E2 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.42■□□□□ 0.38
SCAMP4Q969E2 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SCAMP4Q969E2 AC003669.1-201ENST00000334569 611 ntBASIC17.42■□□□□ 0.38
SCAMP4Q969E2 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.42■□□□□ 0.38
SCAMP4Q969E2 RNPS1P1-201ENST00000507437 918 ntBASIC17.42■□□□□ 0.38
SCAMP4Q969E2 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCAMP4Q969E2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.42■□□□□ 0.38
SCAMP4Q969E2 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.42■□□□□ 0.38
SCAMP4Q969E2 AC073592.4-201ENST00000623827 446 ntBASIC17.42■□□□□ 0.38
SCAMP4Q969E2 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCAMP4Q969E2 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCAMP4Q969E2 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SCAMP4Q969E2 HLA-J-201ENST00000462773 1622 ntBASIC17.42■□□□□ 0.38
SCAMP4Q969E2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCAMP4Q969E2 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
SCAMP4Q969E2 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SCAMP4Q969E2 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.42■□□□□ 0.38
SCAMP4Q969E2 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SCAMP4Q969E2 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.42■□□□□ 0.38
SCAMP4Q969E2 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.42■□□□□ 0.38
SCAMP4Q969E2 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCAMP4Q969E2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.42■□□□□ 0.38
SCAMP4Q969E2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCAMP4Q969E2 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 SIGLEC16-201ENST00000599858 1437 ntBASIC17.41■□□□□ 0.38
SCAMP4Q969E2 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 AL020989.1-201ENST00000422979 469 ntBASIC17.41■□□□□ 0.38
SCAMP4Q969E2 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 KRT18P67-201ENST00000432816 1264 ntBASIC17.41■□□□□ 0.38
SCAMP4Q969E2 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 STK19B-204ENST00000512515 211 ntBASIC17.41■□□□□ 0.38
SCAMP4Q969E2 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 AC133963.1-201ENST00000504166 1679 ntBASIC17.41■□□□□ 0.38
SCAMP4Q969E2 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.41■□□□□ 0.38
SCAMP4Q969E2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
SCAMP4Q969E2 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCAMP4Q969E2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
SCAMP4Q969E2 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCAMP4Q969E2 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCAMP4Q969E2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCAMP4Q969E2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCAMP4Q969E2 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCAMP4Q969E2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCAMP4Q969E2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCAMP4Q969E2 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCAMP4Q969E2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCAMP4Q969E2 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCAMP4Q969E2 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCAMP4Q969E2 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCAMP4Q969E2 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCAMP4Q969E2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SCAMP4Q969E2 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms