Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 PCDHA12-202ENST00000613593 2588 ntBASIC16.6■□□□□ 0.25
TM9SF4Q92544 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.6■□□□□ 0.25
TM9SF4Q92544 AL645608.8-201ENST00000606034 2086 ntBASIC16.6■□□□□ 0.25
TM9SF4Q92544 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.6■□□□□ 0.25
TM9SF4Q92544 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM9SF4Q92544 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM9SF4Q92544 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.6■□□□□ 0.25
TM9SF4Q92544 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM9SF4Q92544 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TM9SF4Q92544 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TM9SF4Q92544 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TM9SF4Q92544 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TM9SF4Q92544 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.59■□□□□ 0.25
TM9SF4Q92544 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TM9SF4Q92544 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TM9SF4Q92544 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TM9SF4Q92544 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TM9SF4Q92544 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.59■□□□□ 0.25
TM9SF4Q92544 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TM9SF4Q92544 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TM9SF4Q92544 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TM9SF4Q92544 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TM9SF4Q92544 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TM9SF4Q92544 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TM9SF4Q92544 RCN1P2-201ENST00000398357 915 ntBASIC16.59■□□□□ 0.25
TM9SF4Q92544 KRT18P13-201ENST00000400056 1290 ntBASIC16.59■□□□□ 0.25
TM9SF4Q92544 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.59■□□□□ 0.25
TM9SF4Q92544 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.59■□□□□ 0.25
TM9SF4Q92544 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TM9SF4Q92544 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.59■□□□□ 0.25
TM9SF4Q92544 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.59■□□□□ 0.25
TM9SF4Q92544 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.59■□□□□ 0.25
TM9SF4Q92544 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.59■□□□□ 0.25
TM9SF4Q92544 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TM9SF4Q92544 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.59■□□□□ 0.25
TM9SF4Q92544 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.59■□□□□ 0.25
TM9SF4Q92544 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TM9SF4Q92544 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TM9SF4Q92544 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.59■□□□□ 0.25
TM9SF4Q92544 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TM9SF4Q92544 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TM9SF4Q92544 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TM9SF4Q92544 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.59■□□□□ 0.25
TM9SF4Q92544 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.58■□□□□ 0.25
TM9SF4Q92544 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TM9SF4Q92544 REXO1L9P-201ENST00000604264 2108 ntBASIC16.58■□□□□ 0.25
TM9SF4Q92544 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TM9SF4Q92544 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
TM9SF4Q92544 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TM9SF4Q92544 HTR7P1-202ENST00000624664 4411 ntBASIC16.58■□□□□ 0.25
TM9SF4Q92544 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TM9SF4Q92544 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.58■□□□□ 0.24
TM9SF4Q92544 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
TM9SF4Q92544 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.58■□□□□ 0.24
TM9SF4Q92544 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TM9SF4Q92544 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.58■□□□□ 0.24
TM9SF4Q92544 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.58■□□□□ 0.24
TM9SF4Q92544 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TM9SF4Q92544 MTCL1P1-201ENST00000446207 792 ntBASIC16.58■□□□□ 0.24
TM9SF4Q92544 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.58■□□□□ 0.24
TM9SF4Q92544 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.58■□□□□ 0.24
TM9SF4Q92544 MTDHP3-201ENST00000594186 672 ntBASIC16.58■□□□□ 0.24
TM9SF4Q92544 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
TM9SF4Q92544 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.58■□□□□ 0.24
TM9SF4Q92544 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.58■□□□□ 0.24
TM9SF4Q92544 ZNF259P1-201ENST00000407656 1365 ntBASIC16.58■□□□□ 0.24
TM9SF4Q92544 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TM9SF4Q92544 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TM9SF4Q92544 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TM9SF4Q92544 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TM9SF4Q92544 SIRPAP1-201ENST00000448467 1770 ntBASIC16.58■□□□□ 0.24
TM9SF4Q92544 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
TM9SF4Q92544 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TM9SF4Q92544 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TM9SF4Q92544 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.58■□□□□ 0.24
TM9SF4Q92544 AC012317.2-201ENST00000623305 2251 ntBASIC16.58■□□□□ 0.24
TM9SF4Q92544 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TM9SF4Q92544 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.58■□□□□ 0.24
TM9SF4Q92544 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
TM9SF4Q92544 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.58■□□□□ 0.24
TM9SF4Q92544 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TM9SF4Q92544 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TM9SF4Q92544 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TM9SF4Q92544 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
TM9SF4Q92544 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.57■□□□□ 0.24
TM9SF4Q92544 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TM9SF4Q92544 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.57■□□□□ 0.24
TM9SF4Q92544 AC080080.1-201ENST00000625121 2420 ntBASIC16.57■□□□□ 0.24
TM9SF4Q92544 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.57■□□□□ 0.24
TM9SF4Q92544 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TM9SF4Q92544 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.57■□□□□ 0.24
TM9SF4Q92544 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TM9SF4Q92544 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TM9SF4Q92544 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TM9SF4Q92544 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.57■□□□□ 0.24
TM9SF4Q92544 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TM9SF4Q92544 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TM9SF4Q92544 MIR574-201ENST00000385209 96 ntBASIC16.57■□□□□ 0.24
TM9SF4Q92544 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TM9SF4Q92544 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms